Pseudoalteromonas espejiana: PESP_a1284
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Entry
PESP_a1284 CDS
T04989
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pea
Pseudoalteromonas espejiana
Brite
KEGG Orthology (KO) [BR:
pea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pea03400
]
PESP_a1284
Enzymes [BR:
pea01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PESP_a1284
DNA repair and recombination proteins [BR:
pea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PESP_a1284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
MMR_HSR1_Xtn
DUF2380
Motif
Other DBs
NCBI-ProteinID:
ASM49422
LinkDB
All DBs
Position
I:complement(1232293..1233849)
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AA seq
518 aa
AA seq
DB search
MANFKVLRLILGDQLNASHSWFKEKDPDTLYLIAELKQETHYVKHHVQKLCAFFYAMERF
AVALKTANYNVLHLSLDETCQDKTLPDLLTRIANTHNCTEIHYQYPDEYRLKKQLSDFKK
NSTFEVTAFDTEHFMLPFERITERFEKNKHVTMEHFYRSMRKQYNILMDGDKPHGGKWNY
DSNNRNKFKKADIAAIPQPKLFNNDVSSILSRLKKHNVSYFGELENNQVPWPLTRKQAQS
CLAYFCEHLLKHFGQFQDAMTDQVNNNASLYHSRLSFALNAKLIHPLYVIEYVLREFNAN
KDMISISQVEGFIRQILGWREYVRCVYWINMPEYADKNQLNATQTLPTYFWDGNVKMNCL
SHALTQSLETAYAHHIQRLMIIGNLCLLTGIHPDEVDSWYLGVYIDAIEWVEMPNTRGMS
QFADDAIIATKPYAASGNYINKMSDYCKNCQYDVKQKVGEKACPYNSLYWQFMNKHRSLL
EKNPRIGMVYKNWDKQDEQLKERTLAQAKHYLTNLNKL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggctaacttcaaagtattgcgtcttattctaggcgaccaacttaacgcgtcacattct
tggtttaaagaaaaagaccctgacacactttatttaatcgcagaactaaaacaagaaaca
cattatgttaagcaccacgttcaaaaattgtgtgcttttttttatgccatggagcgattt
gctgttgcattaaaaactgcaaattataatgtgcttcatcttagcttagatgaaacctgc
caagataaaacactaccagatttgttaacgcgtattgccaatactcacaactgcacagaa
atacactaccaataccctgacgaatataggcttaaaaaacaattatctgattttaaaaaa
aatagtacatttgaagtgactgcctttgataccgagcactttatgttgccgtttgagcgc
attacagaacgttttgaaaaaaataagcatgtcactatggagcacttttatcgctctatg
cgtaagcaatacaacatacttatggacggcgataaaccacacggtggaaaatggaactat
gacagtaataatagaaataaatttaaaaaagctgatattgcagccattccgcaacctaag
ctctttaataatgatgtaagttctattttatctcggcttaaaaaacacaatgtaagctac
tttggtgaactagaaaataaccaagtaccttggccgcttacacgtaaacaagcacaaagt
tgccttgcttatttttgcgagcatttacttaagcattttggtcagtttcaagatgctatg
actgaccaagtaaacaataacgcaagtctgtaccatagccgtttgtcgtttgcgctaaat
gctaagttaattcaccctctgtatgttattgaatatgtgttgcgggaatttaatgccaat
aaagacatgatttctatttctcaagtagagggttttattaggcaaatacttggctggcgg
gaatacgtgcgctgcgtatattggataaacatgcctgaatacgcagataaaaaccaatta
aatgccacacagaccctccccacttacttttgggatggaaatgtaaaaatgaattgccta
agccatgcattaacgcaaagcttagaaacagcgtatgcccatcatattcagcgattaatg
attattggtaatctttgcttacttacaggtatacaccctgatgaggtagatagttggtat
ttaggagtttacattgatgcaattgaatgggttgaaatgccaaatacacgtggcatgagc
caattcgcagatgatgcaattatagctactaaaccctatgcagccagcggaaattacatt
aataaaatgagcgactactgtaaaaactgccaatacgacgtaaaacaaaaagtaggtgaa
aaagcatgcccatataatagcttatactggcagtttatgaataaacaccgctctttactc
gagaaaaacccgcgcataggcatggtttacaaaaactgggacaaacaagatgaacaactc
aaagagcgaacactagcacaagccaagcactatttaacaaatttaaataagttataa
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