Pseudoalteromonas espejiana: PESP_a1293
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Entry
PESP_a1293 CDS
T04989
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pea
Pseudoalteromonas espejiana
Pathway
pea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PESP_a1293 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pea03019
]
PESP_a1293 (pnp)
03016 Transfer RNA biogenesis [BR:
pea03016
]
PESP_a1293 (pnp)
Enzymes [BR:
pea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PESP_a1293 (pnp)
Messenger RNA biogenesis [BR:
pea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PESP_a1293 (pnp)
Transfer RNA biogenesis [BR:
pea03016
]
Prokaryotic type
tRNA degradation factors
PESP_a1293 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
S1_RRP5
OB_RRP5_4th
S1_2
KH-I_KHDC4-BBP
KH_2
KH_SLS1_2
aRib
KH_NusA_2nd
DUF3016
Motif
Other DBs
NCBI-ProteinID:
ASM49430
LinkDB
All DBs
Position
I:1242210..1244336
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AA seq
708 aa
AA seq
DB search
MQAIIKEFQLGQHTVTLETGAIARQADGAVLASIGDTSVLVTVVGKREAQPGQDFFPLTV
NYQERMYAAGRIPGGFLKREGRPNDGETLIARLIDRPIRPLFPNGFVNEVQVIATVVSVN
PEIQPDMVAMIGTSAALAISGIPFSGPIGASRVGYINGEYVLNPTLKELEESQLDLVVAG
TDNAVLMVESEADVLAEDVMLGAVVYGHEQSQAIITAINEFKAEAGKPTWDWTAPEKNVS
LEEKVASLASDKVGEAYRITDKVARKEALGVAKDAVIEALTGELAEGETLDKQEVGKVFG
SLEKKIVRGRIAAGEKRIDGREPDMIRALDVMTGVLPRTHGSAIFTRGETQALVTATLGT
ERDSQLIDDLTGTHKNHFMLNYNFPPFCVGETGFVGSPKRREIGHGNLAKRGISAVMPTL
TEFPYSIRVVSEITESNGSSSMASVCGTSLALMNAGVPIKASVAGIAMGLVKEDEKFVVL
SDILGDEDHLGDMDFKVAGTSNGITALQMDIKIEGITQEIMQIALKQAKAARLHILGVMD
EAISAPSEELSMFAPRIYTMQIPAKKIAEVIGKGGATIRQLTEETGTTIEIEDDGTIKIA
ATDGESAQNAITRIEQLTAELEVGTIYTGKVVRIVDFGAFVNILPGKDGLVHISQISTER
VNNVTDHLSEGQEVKVKVLEVDRQGRVRLSIKEAMDSAAPAADESKDA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagcaattattaaagaatttcaactaggtcaacacacagttaccctagaaacaggt
gctatcgcacgtcaagcagacggcgcagtattagcaagcattggcgatacttcagtactt
gttactgttgttggtaagcgtgaagctcaaccaggtcaagacttcttcccactaacagtt
aactaccaagagcgtatgtacgctgctggtcgtatcccaggtggttttttaaagcgtgaa
ggtcgtcctaacgatggcgaaacactaattgcacgtcttattgaccgtccaattcgtcca
cttttcccaaatggcttcgtaaacgaagtacaagttattgctacagttgtttctgttaac
cctgaaatccaaccagatatggttgcgatgattggtacttcagctgcacttgctatctct
ggtatcccgttcagtggtccaattggcgcatctcgcgtaggttacatcaacggtgaatac
gtacttaacccgacgctaaaagagcttgaagaaagccaacttgatttagtagtagctggc
actgataacgcagtattaatggttgagtcagaagctgacgtacttgcagaagacgttatg
cttggtgctgttgtatatggccatgaacaatctcaagctatcattacagcaattaacgaa
tttaaagcagaagcaggcaagcctacatgggattggactgcacctgagaaaaacgtttct
cttgaagaaaaagtagcatcacttgcatcagataaagtaggcgaagcttaccgcattact
gataaagtagcgcgcaaagaagcacttggcgtagctaaagatgcagtaatcgaagcacta
acaggcgaacttgctgaaggcgaaacgcttgataagcaagaggttggtaaagtattcggt
tcacttgagaagaaaattgtacgtggccgcattgctgcaggcgaaaaacgtatcgatggt
cgtgaaccagatatgatccgtgcacttgacgtaatgactggcgtattaccgcgtactcac
ggttctgctatctttacacgtggtgaaactcaagcactagtgacagctacacttggtaca
gaacgtgattcacagttaatcgatgatttaactggcacacacaaaaaccactttatgctt
aactacaacttccctccattctgtgtgggtgaaactggttttgtaggttctcctaagcgt
cgtgaaatcggccacggtaacctagctaagcgtggtatttctgctgtaatgcctacactt
actgaattcccttactcaattcgtgttgtttctgaaattacagaatcaaatggttcttct
tcaatggcttctgtatgtggtacgtcacttgcgcttatgaacgcaggtgtaccaattaaa
gcatctgttgcgggtatcgcgatgggcctagttaaagaagacgaaaaattcgtagtgctt
tcagatatcttaggtgacgaagatcacttaggtgacatggactttaaagtagcaggtact
tcaaacggtatcactgcactacaaatggatattaagattgaaggtatcacgcaagaaatc
atgcaaattgctcttaaacaagcaaaagctgcacgtttacacattttaggtgtaatggat
gaagcgatttctgcaccttctgaagaattatcaatgtttgctccgcgcatctacactatg
caaattcctgctaagaagatcgctgaagttatcggtaaaggtggcgctacaattcgtcaa
cttactgaagaaacaggcactactattgaaattgaagacgacggtacaattaaaattgct
gcaacagacggtgaaagcgcacaaaacgcaattacacgtattgagcaattaacagcagaa
cttgaagtaggtactatctacactggtaaagttgtacgtattgttgactttggtgcgttt
gtaaacattcttcctggtaaagatggcttagtgcatatctcacaaatcagcacagaacgt
gttaacaacgtgactgaccacctaagcgaaggtcaagaagttaaagttaaagtactagaa
gtagaccgccaaggccgtgtacgtctaagcattaaagaagcaatggattcagctgcacca
gctgctgatgagtcaaaagacgcataa
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