Pseudoalteromonas espejiana: PESP_a1528
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Entry
PESP_a1528 CDS
T04989
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pea
Pseudoalteromonas espejiana
Pathway
pea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PESP_a1528 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pea03400
]
PESP_a1528 (recC)
Enzymes [BR:
pea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PESP_a1528 (recC)
DNA repair and recombination proteins [BR:
pea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PESP_a1528 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ASM49634
LinkDB
All DBs
Position
I:1468543..1471845
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AA seq
1100 aa
AA seq
DB search
MLNIIQSNRMEALQAQFNQLLKVNPLQSPFDKEVVLVQSPGMSQWLKIGLSEDLGLAAQV
DFPLPSSFIWQLYQQLLPNVPKESAFNKPNLAWKLFAILPSCIDEPLYLPLKTYLEGDID
GQKTFALCEKIADVYDQYLMYRPHWIATWDSGKDELDDVDVSIAPWQPDLWRKLVAHSKV
LGQSQFHRANMQGQLLAALETMDNSLLPKRISLFGISAIASSQLEVFEALSKKTEVFLFF
FNPSEHYWGDIVDEKTAAKIAAKYAKMPLLEAQQKKQTNPDEEYYFIGNPLLSSWGKLGR
DYFEQLVQLDARWIDGFIDAFDDTLLGQVQSEIYQLAFKGESLTDNKEWFINDKGKLLIS
ENDTSITLSDCHTPLREVERLHDYLLNLFNQNPALTPKDIIVMMPDVGTYSPYIEAVFGG
AQNTSRFIPYALADLAIEQEKPVLSSFASLANLPFSRFGVSDILDLLQVTQIAEKFGLEA
HEYEQIQYWLERVGVKWGINAEHKSSFDLPAIDLNTWQHGLNRLLLGIAQRDEQCPFNGI
YSADEVEGMALETLNKLVHFIDVLQTYKEHLTPDDTLSNKAAILSELIGALYHNDGDESW
DLLILQKVLEELQKHDENGDYSQAVSQRIVSYLIKQGIQEKGVGQRFLVGQVNFCTLMPM
RAVPFKVVCMLGLNDADYPRTVQPIGFDLVPYSKKQKGDRSRKLDDRYLFLEALLSAREN
LYMSYIGRSCFDNQPRMPSTLVSELLEYIGRSFTLPKNSINTLPACLINQQHLQPFNSTY
YAKSDQQNSALNNHSYNPIWLPSETILPQPLSAIDVAAPEQLELDVFIRSVCNAQESFYQ
QTLGLRLPEFNEIAKDEEPFSLDALRRYFYLDEILEANINEQPLSTEQILQRGELPQANV
GNLVFESMEHRVDALAGQVKEHIKSGKTEPVEVSLHIQGTTIEGWLNHIYLQKQVFYRSA
SIKAKDLIKGFIYHLVAQSMGQNVETLLLGLDKQISFAPLSKSDADKHLNEWFELYQALR
KEPVAFFPVSGYEYVKSGGDIGKAISKFSPQYIGRGEGENPYIRLTVQSLSDCQDEFIKW
SDKLLAPLFEHAKESDHASA
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatattattcaatcaaaccgtatggaagcgctgcaagcacagtttaatcagctg
ttaaaagtaaatccgttgcaaagcccattcgataaagaagtggtattagtgcaatcgccc
ggtatgtcgcagtggctaaaaattggtttaagtgaagacttagggcttgccgctcaggtt
gattttccgctgccctcaagttttatttggcagttgtatcaacagctattgccaaatgta
cctaaagagtcggcctttaataagccaaaccttgcttggaaactatttgcaatactgcca
agctgtattgatgagccactttatttgccattaaaaacctatttagagggcgatatagac
gggcaaaaaacgtttgcgctgtgcgaaaaaattgccgatgtgtacgaccaatatttaatg
taccgcccacattggattgccacttgggatagcggcaaagatgaacttgatgatgtagac
gtaagtattgccccgtggcaacccgatttatggcgaaagctggtggcgcacagtaaagtg
cttgggcaaagccagtttcatcgtgccaatatgcaagggcagttactggctgcacttgaa
actatggataacagtttattgcctaagcgtattagcttatttggtatatcggccattgcc
agctcacaacttgaagtgtttgaggcattaagcaaaaaaaccgaagtgtttttatttttt
ttcaaccccagtgagcattattggggcgatattgtagatgaaaaaaccgctgcaaaaata
gcagcaaaatacgccaaaatgccgcttttagaagcacagcaaaaaaaacaaaccaacccc
gatgaagagtattactttattggcaatccgcttttatcatcgtggggtaaattagggcgc
gactattttgagcaacttgtgcaacttgatgcccgttggatagatggctttattgatgcc
tttgacgacacattacttggccaagtacaaagtgaaatttaccaacttgcgtttaaaggg
gagtccctgaccgataataaagaatggtttataaacgataaaggcaaactactaataagt
gaaaacgacaccagtataacgctcagtgattgccatactccccttagagaagtagagcgt
ctgcacgattatttgcttaatttgtttaatcaaaaccctgcgcttacccccaaagacatt
atcgttatgatgcccgatgttggcacgtacagcccgtatattgaagccgtttttggcggg
gcgcaaaacaccagccgttttattccttacgcgcttgccgatttagccatagagcaagaa
aagccagtactgagctcgtttgcaagtttggctaatttaccgttttcgcgctttggcgta
tcagatattctcgatttactgcaagtgacgcaaattgccgaaaaatttggccttgaagcg
cacgagtacgagcaaattcaatattggcttgaacgcgttggcgtaaaatggggcataaat
gctgaacataaaagtagctttgacttaccggcaatcgatttaaatacctggcagcatggg
cttaatcgtttattgctaggcatagcgcagcgagatgaacaatgcccgtttaacggtata
tacagtgcagatgaagtagaaggcatggcgctagaaacgcttaataagttggtgcacttt
attgatgtgctacaaacttataaagaacacttaacccctgatgacactcttagtaataag
gcggctattttatctgaactaattggcgcgttgtaccacaacgacggcgacgaaagctgg
gacttgctgatactacaaaaggtacttgaggagctgcaaaagcatgacgagaacggcgat
tacagccaagctgtttcgcagcgtattgttagttacttaataaaacaaggcattcaagaa
aaaggcgtaggacagcggtttttagtcggccaggttaatttttgtacgcttatgcccatg
cgcgccgtgccatttaaagtagtgtgtatgctaggtttaaatgatgctgactacccgcgt
accgtgcaacctattggttttgatttagtgccgtattctaaaaaacaaaaaggtgaccgt
tcacgtaaattagacgaccgttacttatttttagaagcgctacttagtgcccgcgaaaat
ttatacatgagctatattggccgctcgtgttttgataaccaaccgcgtatgccatcaacc
ttagtcagtgagcttttagaatatatagggcgcagttttacgttacctaaaaacagcatt
aacaccttgccagcgtgtttaattaaccaacaacacttacagccctttaatagcacttat
tatgcaaaaagcgatcagcaaaatagtgcgctcaataaccacagttataacccaatttgg
ctgccaagcgagacaattttaccgcagccgctaagcgctattgatgtagcagccccagag
caacttgagcttgatgtatttattcgtagcgtgtgtaacgcacaagagagcttttaccag
caaacgttaggcttacgcctgcccgaatttaacgaaatagcaaaagatgaagaacccttt
agcctagatgcgctgcgccgctacttttatttagatgaaatactcgaggcaaacattaac
gagcaaccactaagcaccgagcaaatactacaacgtggtgagttgccacaagctaatgtt
ggtaatttagtgtttgaaagcatggagcaccgcgttgatgcccttgcagggcaagtaaaa
gagcatataaaaagcggaaaaaccgagccagttgaggtctcgctgcatatacaaggcacc
acaattgaggggtggcttaatcatatttacttgcaaaaacaagtgttttaccgcagtgcc
agtataaaagctaaagatttaattaaaggctttatctaccaccttgtagcgcaaagcatg
gggcaaaatgtagaaaccttattactgggtctcgacaagcaaattagctttgcaccgctg
agtaaaagtgatgcagataaacaccttaatgagtggtttgagctataccaagcgctgcgt
aaagagcccgtggcgttttttccggtaagtggctacgaatatgtaaaaagcggcggtgac
attggcaaagccattagcaagtttagcccacaatatattgggcgtggcgaaggcgaaaac
ccgtatattcgcttaacagtgcaatcgctcagcgactgccaagacgaatttataaagtgg
agcgataagttacttgcaccattgtttgaacacgcaaaggagagtgaccatgcaagcgct
taa
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