Pseudoalteromonas espejiana: PESP_a2629
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Entry
PESP_a2629 CDS
T04989
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pea
Pseudoalteromonas espejiana
Pathway
pea03030
DNA replication
pea03430
Mismatch repair
pea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PESP_a2629 (dnaE)
03430 Mismatch repair
PESP_a2629 (dnaE)
03440 Homologous recombination
PESP_a2629 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pea03032
]
PESP_a2629 (dnaE)
03400 DNA repair and recombination proteins [BR:
pea03400
]
PESP_a2629 (dnaE)
Enzymes [BR:
pea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PESP_a2629 (dnaE)
DNA replication proteins [BR:
pea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PESP_a2629 (dnaE)
DNA repair and recombination proteins [BR:
pea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PESP_a2629 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ASM50572
LinkDB
All DBs
Position
I:complement(2542608..2546099)
Genome browser
AA seq
1163 aa
AA seq
DB search
MAAPDFVHLRVHSDFSMVDGLAKTKPIVARAQELEMPALAITDQMNFCGLVRFYGATHNA
GIKPIVGADFWLRSPEFPDEPCRITILAKDNDGYKNITLLISEAYQRGHVFHRPVIDREW
LVKHKEGLIILSGAKDGDLGKALLKGNPGVIESVVSFYKQHFSDHYYLELVRTNRPLEED
YLHMAVELADKEQLPVVATNEVVFLKPENFEAHEIRVAIFDGYTLDDKRRPKRFSQEQYL
KTPEQMAELFSDIPEALQNTVEIAKRCNVTVQLGTYFLPDYPTGSLKIEDFLVKVSEDGL
EERLQFLFPDEEDRKVKRVEYDERLAVELGVINQMGFPGYFLIVMEFIQWSKDNNIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVSA
LYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKMIPGDPGMTLAKAFEVEPR
LQEAYDGDSEVKDLIDMCRILEGCTRNAGKHAGGVVISPTTITDFAALYCDDEGKFPVTQ
FDKNDVETAGLVKFDFLGLRTLTILQWAVDMTNVRMAREGKKPVDINTIPLDDKKSIELL
LRAETTAVFQLESRGMKDLVRRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKLGREE
ISYPDAQYQHESLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSTFEEGARNNGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHHPA
EFMAAVMSADMDNTDKIVILVDECENMKLTLLPPDVNAGEFKFTVNLQGEIVYGIGAIKG
VGEAPVEAILEAREKGGPFKDLFDFCARVDLKRLNKRVTEKLIYAGALDQLGPEKTQAGR
ATLLASLKDAMRAADQHNKAEQLGQSDLFGLLATEPDEVEQAFIKATPLTDNQWLDGEKE
TLGLYLTGHPINQYRRELRHYTSGKLVDLQPTNRDVLSSAAGLVISARTLINKKGNRWGL
ITLDDKSARIDVRLFPEQFEMYQEMLQVNNILVISGQVSFDNFSGGITMTAREINTIAQA
REKRIKAIKMTLNMVQIEAGFFDKLQKVLEPYKMGTCPIKVYYQRPDALAQLTLGIEWCV
TPSDDLIHKLSLMAAQDVELEFN
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccagattttgtacatttaagggttcactcagacttttcgatggttgatggc
ttagctaaaaccaagccaatagttgctagagcgcaagagctagaaatgcctgcgcttgcg
ataaccgatcaaatgaacttttgtggtttagtgcgtttttatggtgctactcataatgcc
ggtataaagccgattgtaggcgcggatttttggttgcgcagccctgaatttccagatgaa
ccatgccgaattacaattttagccaaagacaacgacggttataaaaatataacgctatta
atatctgaagcgtatcagcgcgggcatgtatttcatcgtccggtaattgaccgtgagtgg
cttgttaagcacaaagaaggcttaattattctctcgggcgctaaagatggcgatttaggt
aaagcgcttttaaaaggcaacccgggcgttattgaatctgttgttagcttttacaagcag
cactttagtgatcattactatttagagcttgtacgaactaatcgcccacttgaagaagac
tacctacacatggcggtagaacttgcagataaagagcagttaccggttgtagccactaac
gaagtggtatttttaaagcctgagaactttgaagcgcatgaaattcgagtggccattttt
gatggctacacccttgatgataaacgccgccctaaacgcttttcacaagaacaataccta
aaaacgcctgagcaaatggctgagctttttagcgatattcctgaggcgctacaaaatacc
gtagaaatagccaaacgctgtaatgtaacggtgcaattaggcacttacttcttaccagat
tacccgacaggttcattaaaaattgaagactttttagttaaagtttcagaagatggcctt
gaagagcgactgcagtttttattccctgacgaagaagatagaaaagtaaaacgcgtcgaa
tacgatgaacgtttagccgtagagcttggcgtaattaaccaaatgggttttccgggttac
ttcttaatcgtaatggagtttattcagtggagtaaagataacaatattccagtaggtcct
ggacgtggttctggtgcgggttcattagtggcatacgcacttaaaattaccgaccttgac
ccgcttgagtttgatttactctttgagcgattcttaaaccctgaacgtgtatcaatgccc
gatttcgacgtcgatttttgtatggacaggcgcgacgaagtaattgatcacgtatcggcg
ctttatggccgtgacgcggtatcgcaaattattacctttggtactatggcggcaaaagcg
gtaatacgcgatgtaggccgtgtacttggccacccatatggctttgttgatcgcatttca
aagatgatcccaggcgatccgggtatgacccttgctaaagcctttgaagtagagccgcgc
cttcaagaagcatacgatggcgactcagaagtaaaagatttaatcgacatgtgtcgcatc
ctagaagggtgtacacgtaatgccggtaagcacgccggtggtgttgtaatatcgccgacg
accattaccgactttgctgcactttattgcgatgacgaaggtaagttcccggttactcag
tttgataaaaacgatgtagaaaccgcaggcttagttaagttcgatttcttgggcttacgt
accttaaccattttgcagtgggcggttgatatgaccaacgtgcgtatggcgcgcgaaggc
aaaaagccggtcgatataaataccattccactggatgataaaaaaagtatagagctatta
ctgcgcgccgaaacaactgcggtgtttcagttagagtcacgcggtatgaaagatctcgta
cgccgcttaaagcccgattgctttgaagatatgattgcattggtagccttattccgccca
ggccctttgcaatcaggcatggtagataactttatcgaccgaaagctcggccgagaagaa
atttcataccccgacgcgcaataccaacacgaaagtttaaagccaatacttgaacccaca
tacggcattattttgtatcaagaacaagtaatgcaaatagcccaggtattagccggttac
accctaggtggcgccgatatgttacgtcgtgctatgggtaagaaaaaacccgaagagatg
gctaaacagcgttcgacgtttgaagaaggtgcccgaaacaacggcattgacggcgaacta
gccattaaaatcttcgacttggtagaaaaatttgccggttatggttttaacaaatctcac
tcggcagcctatgcattagtgtcgtaccaaacgctgtggatgaaaacacaccacccagct
gaatttatggctgcggtaatgtcggcagatatggataacaccgacaaaatagtaattttg
gtggatgaatgtgaaaacatgaaactcaccttgttaccgccagatgtaaacgcgggtgag
tttaagtttacggtaaacctgcaaggcgaaattgtttacggtattggtgctattaaaggt
gtgggcgaagcaccggtagaggcgattttagaagcacgcgaaaaaggcggtccgtttaag
gatttatttgatttttgtgcccgtgtagatttaaaacgcttaaataaacgtgtgactgaa
aaattaatttacgctggtgcgcttgatcaattaggaccagagaaaacccaagcagggcgt
gctactttattagctagtttaaaagatgctatgcgcgcagccgatcaacacaacaaggca
gagcaacttgggcaaagcgatttatttggtttattagccaccgagccagatgaagtagaa
caagcatttattaaagccacaccacttaccgataaccagtggcttgatggcgaaaaagag
accctaggcctttatttaacagggcatccgataaatcagtatcgtcgcgagctcagacat
tataccagcggtaagctggtggatttacaaccaactaatcgtgatgtactctcaagcgcg
gcgggtttagttatttcagcgcgaaccttaattaataaaaaaggaaatcgctggggctta
ataactttagatgacaagagcgcccgtattgatgtacgcttgtttccagaacagttcgaa
atgtaccaagaaatgcttcaagttaacaatatcttggtaatatctggacaggtcagcttt
gataacttctccggtggcattacaatgaccgccagagaaataaacaccattgctcaagcg
cgtgaaaaacgcattaaagcgattaaaatgacgctgaacatggtgcaaatcgaggcaggt
ttcttcgataaattacaaaaagtactcgaaccttataaaatgggaacgtgtccgatcaag
gtttattaccaacgccccgatgcgttggctcaattaaccctagggatcgaatggtgtgtt
acgcctagcgacgacttaattcataagttatcgcttatggctgcacaagatgtagaacta
gaatttaactga
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