Pseudoalteromonas espejiana: PESP_a3349
Help
Entry
PESP_a3349 CDS
T04989
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
pea
Pseudoalteromonas espejiana
Pathway
pea02020
Two-component system
pea02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pea00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PESP_a3349 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PESP_a3349 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pea03021
]
PESP_a3349 (rpoN)
Transcription machinery [BR:
pea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PESP_a3349 (rpoN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
aRib
Motif
Other DBs
NCBI-ProteinID:
ASM51175
LinkDB
All DBs
Position
I:3215023..3216522
Genome browser
AA seq
499 aa
AA seq
DB search
MRQSLQLRMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALDSNPLLEVEEQDYTEDSAG
KNEQKADTDDVTVSASTDDSASEYEQDSGEALNKDTVSDDMAMDVTWDEYMSAAPAASSG
PMPEDESIYQGASTETLHEYLMWQLQLTPFSPTDEAIAIAIVEAVDDSGILTLSCEEILE
SFNQEHDDDVEVELDEIEAVLKRIQLFDPVGIAARSLQECLCIQLNQFDKDTPLIEQTKM
ILTDHIDLLAARDYRTLMKKTKLKEDELKEVMTLIHTLNPKPADTIVREESEYVIPDVSV
KKIKGRWVVELNPDSMPKIRVNSQYAAMSRTVKSSGDSQFIRSHLQEAKWFIKSLESRND
TLLKVTNCIVKQQQAFFEHGPEAMKPMVLNDVAEMVEMHESTISRVTTQKYMHTPRGIFE
LKYFFSSHVSTENGGECSSTAIRALIKKLIAAENSAKPLSDSKIADILAEQGIKVARRTI
AKYRESLAIPPSNQRKSLI
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaatcattacagctgcgcatgggccagcaacttacaatgactccacaattgcag
caagcgatacgtttgctgcagctcagtacattggatctccagcaagaaatacaagaagca
cttgatagcaacccgctattagaagttgaagagcaagattacacggaagattcggctgga
aaaaacgagcaaaaagcagacaccgatgatgtaaccgtaagcgcatcaactgacgattca
gccagcgaatacgaacaagacagcggtgaagctttaaataaagacaccgttagcgatgat
atggcaatggatgttacgtgggatgaatacatgagcgccgcgcctgcagcttcatcaggc
ccaatgccagaagatgagtctatttaccaaggtgcttctaccgaaacgcttcatgagtat
ttaatgtggcagcttcaacttacaccctttagccctaccgacgaagcaattgctattgcc
attgtagaagctgtagatgactcaggtattttaacgttaagctgcgaagaaattttagaa
agctttaaccaagagcacgatgatgacgttgaagttgaacttgatgaaattgaagctgtt
ttaaagcgaattcaattatttgaccctgtaggtattgcagcacgaagcctacaagagtgc
ttatgtatacagttgaatcaatttgataaagatacacctttaatagaacaaacaaaaatg
atcttaaccgatcatattgatctattagcagctcgcgactatcgtacattaatgaagaaa
acaaagctcaaagaagatgagcttaaagaggtaatgacattaatacacactctcaaccca
aaacctgctgataccatagtgagggaagagtctgagtatgttatacctgatgtatcggtt
aaaaaaattaaaggccgctgggtggttgagttaaacccagatagcatgccaaaaatacgt
gtaaatagtcagtatgcggctatgtcgcgtaccgtaaaatcttcgggtgatagccaattt
attcgctctcacctgcaagaagctaaatggtttattaaaagcctagagagcagaaacgat
acgctattaaaagtaactaactgtattgtaaaacagcagcaggcattttttgaacatggc
cctgaagccatgaagcctatggtattaaacgatgttgctgaaatggtagaaatgcacgag
tcgacaatttcgcgtgtaactacgcaaaaatatatgcatacaccacgtggtatttttgag
cttaaatactttttctcaagccatgtaagcaccgaaaacggtggtgagtgctcatctaca
gcaatacgcgccttgattaaaaagctaattgccgcggaaaactcagctaaaccattgagt
gatagcaaaattgcggatatattggcagagcaaggaattaaagtagctagacgcacaata
gcaaaataccgtgaatcgctagctattccaccgtcaaatcagagaaagagtttgatataa
DBGET
integrated database retrieval system
