Pseudoalteromonas espejiana: PESP_a3596
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Entry
PESP_a3596 CDS
T04989
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pea
Pseudoalteromonas espejiana
Pathway
pea03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pea00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PESP_a3596 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pea03021
]
PESP_a3596 (rpoA)
03400 DNA repair and recombination proteins [BR:
pea03400
]
PESP_a3596 (rpoA)
Enzymes [BR:
pea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PESP_a3596 (rpoA)
Transcription machinery [BR:
pea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PESP_a3596 (rpoA)
DNA repair and recombination proteins [BR:
pea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PESP_a3596 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ASM51384
LinkDB
All DBs
Position
I:complement(3447726..3448562)
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AA seq
278 aa
AA seq
DB search
MPGCAVTEVEIDGVLHEYSAKEGVQEDIIEILLNLKGLAVTLEGKDEVFLTLTKSGVGPV
TAADIQHDGDVTIANPDHVICHLTTDNSEISMRIRVERGRGYVPASSRLSSDDDERPIGR
LLLDASFSPVERIAYSVESARVEQRTDLDKLIIDMETNGTLDPEEAIRRASTILAEQLDA
FVDLRDVTEPEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEQIQYIGDLVQRTEVELL
KTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASLAE
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatgtgcagtaactgaagttgaaatcgacggtgtattgcatgagtacagcgcg
aaagaaggcgtacaagaagacatcattgaaatactactaaaccttaaaggtctagcagta
acgttagaaggcaaagatgaagtttttctgaccctgacaaaatctggtgtaggccctgtg
actgcggctgatattcagcacgatggcgatgtaacaattgctaatccagatcacgttatt
tgtcatttaacgacagataacagcgagatcagcatgcgtattcgtgttgaacgtggtcgt
ggttatgtgccggcatctagtcgtttatcctctgatgacgatgagcgtccaattggtcga
ttgctgcttgatgcatcattcagcccagttgaacgtattgcgtactcggttgaatcagcc
cgtgttgagcaacgtacagacttagacaagttaatcattgatatggaaacaaacggcact
ttagatcctgaagaagcgatccgccgtgcgtctactatcttagctgagcaattagatgca
ttcgtagatttacgtgatgtaactgagccagaagagaaagaagagaagccagaattcgat
cctattctacttcgtccagttgatgatcttgaactaacagtacgttcagcaaactgtttg
aaagccgagcaaattcaatatatcggtgatttagttcagcgcactgaagttgagcttctt
aaaacgcctaatctaggtaagaagtctctaactgaaataaaagacgtgctagcttcacgt
ggtctttctctaggcatgcgcctagaaaattggccgcctgcaagcctagctgaataa
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