Pseudoalteromonas espejiana: PESP_b0168
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Entry
PESP_b0168 CDS
T04989
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pea
Pseudoalteromonas espejiana
Brite
KEGG Orthology (KO) [BR:
pea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pea03400
]
PESP_b0168 (sbcD)
DNA repair and recombination proteins [BR:
pea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PESP_b0168 (sbcD)
Archaeal homologous recombinant proteins
PESP_b0168 (sbcD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
DNA_pol_E_B
DUF7588
Motif
Other DBs
NCBI-ProteinID:
ASM51779
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Position
II:complement(137239..138486)
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AA seq
415 aa
AA seq
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MKVLHTSDWHLGQQFYEHDRREEHTAFFTWLLTTLKEQQIDLLLVAGDIYHTATPSASAE
NQLYQFIKDAKKCCPQLHVVIIAGNHDSANRILAAQPLLAQFDTHVVGRFDINTPSNTVI
ELNINNKRAVVVAMPFLRSSDISSLSQTKNGPSYAQGVANAYELALDHAYKINEQNSPLI
VMGHLHAKGGDISSDSERNLVIGGEESISANVFGNKANYVALGHLHKAQQVAKNETIRYS
GTPIPMSFSERNYTHQVNVIEFKSDEKQTISTTVNPLYIPRSADVIILPKGECVPLSDLC
EQIKNFDTAQNTVAPYLRVKLKSSDTDTTFREQIELALEGKNVKFCGIERVREQTTQTNN
DPVFEDLSEIEMLNPQNLLEQAFANDKDMAGQSVPDELKALLNNVISELTEQEQL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttctccacacctcagattggcaccttggccaacaattttatgaacatgaccgc
cgtgaagagcacactgctttttttacatggctacttacaacactaaaagagcaacaaata
gacttactgcttgttgctggcgacatttaccataccgccacgccaagtgccagcgccgaa
aaccaactttatcaatttataaaagacgctaaaaaatgctgcccacaattacatgtggtt
attattgccggtaaccacgactctgctaatcgtatattggcggctcagcctttacttgca
caatttgacacacacgtagtgggccggtttgatataaacacgcctagcaacacagttatt
gaactaaacattaataataagcgcgctgtagtcgttgctatgccttttttacgctcaagc
gatataagttcactaagccaaacaaaaaacggccctagctacgcacaaggcgttgcaaat
gcatatgagcttgccttagatcatgcttataaaataaatgagcaaaactcaccgcttata
gtaatgggccacttgcacgctaaaggcggcgatatatcaagtgattcagagcgtaactta
gtaataggtggggaagagtctatttcagccaatgtatttggcaataaagccaattatgta
gctctggggcatttacacaaagcccagcaagttgctaaaaacgagactattcgctacagc
ggcacgcctattcctatgtcgttttcagagcgtaattacactcatcaagttaatgttata
gaatttaaaagcgatgaaaaacaaaccattagcacaactgtaaaccccctttacattccg
cgctcagccgacgttattattttacctaaaggggagtgtgtaccgctgagtgatttatgt
gagcaaataaaaaacttcgatacagcgcaaaataccgtagcaccctatttacgcgtaaag
cttaaatcaagcgataccgacactacattcagagagcaaattgagcttgcacttgaaggc
aaaaatgtaaaattttgcggtatcgaacgcgtacgcgaacaaacaactcaaaccaacaac
gaccccgtatttgaagatttaagcgaaatagaaatgctcaacccacaaaatttattagag
caagcttttgcaaacgataaagacatggcagggcaaagtgtacccgatgaactaaaagcc
cttttaaacaacgtaataagcgaactgacggagcaagaacaactatga
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