Pseudoalteromonas espejiana: PESP_b0532
Help
Entry
PESP_b0532 CDS
T04989
Symbol
ada-alkA
Name
(GenBank) AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pea
Pseudoalteromonas espejiana
Pathway
pea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PESP_b0532 (ada-alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pea03000
]
PESP_b0532 (ada-alkA)
03400 DNA repair and recombination proteins [BR:
pea03400
]
PESP_b0532 (ada-alkA)
Enzymes [BR:
pea01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PESP_b0532 (ada-alkA)
Transcription factors [BR:
pea03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PESP_b0532 (ada-alkA)
DNA repair and recombination proteins [BR:
pea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PESP_b0532 (ada-alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
M20_dimer
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ASM52079
LinkDB
All DBs
Position
II:471151..472503
Genome browser
AA seq
450 aa
AA seq
DB search
MTNQYWQKARQSRDPRFDGLFYVAVKSTGIYCRPICPAPTAHEKNVVYYQYAHNAAQAGF
RPCIRCRPDSAPGSAAWQGTKTTALRAKQLIDLGDDHNCEHLAERLGITSRYLRRLFNEH
FGMSITQYRLFNQCHFAKKLIQETTLPLTDIAFAAGFNSVRRFNDAFLHQLNIAPSQLRK
SKKEPTSMITLTLPFRPPYNWQALHSFLSKRLIKPMEWITATSYGRTFQLGEARGYFEAQ
YIPEKHHFSVKVDINKTEYLQQVINNIRRVLDVDADITHIENHLKNTINDSFKLSEGLRL
PGIWSSFEAGIRAVLGQQVSVSAAHVLVTKLVAELGSKENDKVYFPAPSKLANSEFEFFK
LPQARKNALKNLAQYCDNNPQNDDLDNWLDIKGIGPWTVNYAKLRGQSQPDILLAGDLGV
KKALIGAKAFNPELSAPFRSYLTFQLWQQL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatcaatactggcaaaaagcacggcaaagtagagaccctcgttttgatggttta
ttttatgtagcggttaaaagtactggtatttattgtaggccaatttgccccgcgcctact
gcacacgaaaaaaatgtagtgtattaccaatatgctcataatgcagcgcaagctggtttt
aggccgtgtatacgttgcaggccagatagcgctccgggcagtgctgcgtggcaaggcaca
aaaacaacagcacttagggcaaagcaattaatagatttaggggacgatcacaactgtgag
cacctcgcagagcgcttagggatcaccagccgctatttaagacgtttgtttaatgaacac
tttggtatgtcgattactcagtatcggctatttaatcagtgccactttgctaaaaagtta
attcaagaaaccacattgccattaaccgatattgcctttgctgctggttttaatagtgta
cggcgttttaatgatgcttttttacaccaattaaatatagcgccttcacagctcagaaaa
tcaaaaaaagagccaacctctatgatcacattaactttgccttttagaccgccttataac
tggcaggcgctacatagctttttatcaaagcgattaattaaaccaatggaatggattaca
gcaacaagttatggccgcacatttcaattaggcgaagcccgcggttattttgaagcgcaa
tatatacctgaaaaacaccactttagcgttaaggttgatataaacaaaaccgagtattta
cagcaggtgattaacaatatacgccgagtgctcgatgttgatgccgacataacacatatc
gaaaaccatttaaaaaatactattaatgattcatttaaactaagtgaaggcttaaggctc
cctggtatttggtcaagttttgaagcgggtattcgggcggtattgggccagcaggtaagc
gtaagtgcagcgcatgtattggttactaaactagtcgcggagctaggtagtaaagaaaac
gacaaagtttactttcctgctcctagcaaacttgctaatagcgaatttgagttttttaaa
ctgccacaagcgcgcaaaaatgcattaaaaaatttagcgcagtattgcgataataaccca
caaaatgatgacttagataactggcttgatataaaaggcatagggccatggacagtaaat
tacgctaagttacgtgggcaaagccaacccgatatacttttagcgggtgatttaggcgta
aaaaaagcgctaataggtgcaaaggcgtttaaccccgagcttagcgccccgtttcgctct
tacttaacttttcaactttggcagcaactataa
DBGET
integrated database retrieval system
