Pseudoalteromonas espejiana: PESP_b0735
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Entry
PESP_b0735 CDS
T04989
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pea
Pseudoalteromonas espejiana
Brite
KEGG Orthology (KO) [BR:
pea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pea03400
]
PESP_b0735 (phrB)
Enzymes [BR:
pea01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PESP_b0735 (phrB)
DNA repair and recombination proteins [BR:
pea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PESP_b0735 (phrB)
Prokaryotic type
PESP_b0735 (phrB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ASM52254
LinkDB
All DBs
Position
II:657922..659316
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AA seq
464 aa
AA seq
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MNTLFWFRRDLRLFSNEALIEALNNGANQAIFFVCEKQWQQHNTAPIQIDLLKRRVKYIR
EHLADFGVTLHVISAPYFDDCDDALLSFCDKNKIEHIVANTEYELNEVNRDARILAKCDD
KNITFTLYEGDLIAPVGSVKNQSNEMYKVFTPFKNQWLKQHQDTHFSLLPWTAKKNKIDV
ASTDLLEGDGSSEKWPIDDDSLASIVDNFICDKMSSYDDQRDIPSIKGTSGLSPYLALGI
VSTKQLLVNIQNRYPDILTTSKSKTFTWVNELIWREFYRHLLSEYTKLSRGENFNEKYNA
VKWRKSDSEFKAWCEGKTGYPLVDAAMRQLVQTGWMHNRLRMVVASFLTKHLLIDWREGE
RFFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRVFNPITQSERFDPNGKFIRKYLPELE
KVPDKHIHFPHAYLASIGADKQCYWPAIVDHKAARERALAAFKV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaatacactattttggtttaggcgcgatttgcgccttttttctaatgaagcgctcatt
gaagcgttaaataatggcgctaatcaggccattttttttgtttgcgaaaaacaatggcag
caacataacacagccccaatacaaattgatttactcaaacgacgtgttaaatacatacgc
gagcatttagctgattttggcgttacgctgcatgttataagtgctccttattttgatgat
tgcgatgatgcgcttttgtcattttgcgataaaaataaaatagaacatattgttgcaaac
actgagtatgagctaaacgaagtaaatcgtgatgcgagaattttagccaagtgtgatgat
aaaaatattacctttacgttatacgagggagatttaattgcccctgttggtagtgtaaaa
aatcaaagtaacgaaatgtacaaagtgtttacgccttttaaaaatcaatggcttaagcaa
caccaagacacacattttagtttattaccttggactgctaaaaaaaataaaattgatgta
gccagcactgatttactagaaggggacggcagctcagaaaagtggccaatagatgatgat
agtttagccagcatagtcgataactttatttgcgataaaatgagcagctatgatgaccaa
cgagatataccaagtataaaaggtacttcgggtttgagcccttatttggcattaggtatt
gtgagcacaaagcaattactagtaaatattcaaaaccgctatccagatattttaaccact
tcaaaaagcaaaacatttacgtgggttaacgagcttatttggcgagagttttaccgacac
ctgttgagtgaatataccaaactttcgcgcggagaaaactttaacgaaaagtataatgct
gttaaatggcgcaaaagtgacagtgaatttaaagcttggtgcgaaggcaaaacaggttat
ccgttagttgacgcagcaatgaggcagttagtgcaaacgggctggatgcataaccgttta
agaatggttgtagcaagctttttaactaagcacttattaattgactggcgcgaaggcgaa
cgcttttttatgcagcacttaattgatggcgatttagcctctaacaatggtggctggcag
tgggctgcaagtaccggatgtgacgcgcaaccttattttagagtatttaatcctattacc
caaagcgaacgctttgatcctaacggcaagtttatacgtaaatatttgccagaactcgaa
aaagtaccagataaacacatacattttcctcatgcatatttagcatcaataggtgctgat
aagcagtgttactggcctgcaatagtggatcataaagcagcgcgagaacgtgcgttagct
gcatttaaggtgtga
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