Peptostreptococcus equinus: O0R46_01735
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Entry
O0R46_01735 CDS
T08671
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
peb
Peptostreptococcus equinus
Pathway
peb03420
Nucleotide excision repair
peb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
peb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O0R46_01735
03430 Mismatch repair
O0R46_01735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peb03400
]
O0R46_01735
Enzymes [BR:
peb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O0R46_01735
DNA repair and recombination proteins [BR:
peb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O0R46_01735
MMR (mismatch excision repair)
Other MMR factors
O0R46_01735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
DEAD
AAA_30
AAA_11
AAA_14
DUF3850
Motif
Other DBs
NCBI-ProteinID:
WAW15195
LinkDB
All DBs
Position
334596..336476
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AA seq
626 aa
AA seq
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MDILNKNQKIAVEHVSGPCLVLAGPGSGKTRVIAHRIINLVKNKNVAPTRILAISFTKAS
SMEMKARTLKMGVDNAFNKVNFGTFHATFFRILRKYQGLGLESIISEIDRYKLIKSILKH
LNISDYSDDDINDVLSEISYVKNELMNYMDFNSQIFNKDEFLEIYRLYEKGKKQYNKIDF
DDMLIMTYELLNTNNDVLSIVRQVFKYILIDEFQDINRVQFETIRLIAHPNNNIFVVGDE
DQSIYGFRGARPDFMLNFSKYFKGAQEIVLDTNYRSKRNIVDCSQGLIKNNKDRYDKNIV
AKSTNEGLIKTIYPKDTDDEAIFIGKEILNVVNDKNAGFEYSDFAVIYRTNRQARAFVDA
FLDLRIPFVLKDSAKTIYDHWVSLDILAYLRIAMDIGTTDDWIRIINKPFRYVSRDSISK
ASKGLNFFDQLMEDDRLKSYQKKDLNDLLEDLNYIKGLAPGYAISYIRSTLDYDRYILEY
CNQRKIKSKQIVEILDEIETSAKVYKTNLKFFEHIDEVREEVKIRANKNANQINSESQRD
GVILSTMHSSKGLEFRNVYVAGVNKGVIPYNNNDDENMSNSTLEEERRLLYVTITRAKEN
LTISSPQKRFGRKIDKSEFLKEIKFS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggatatacttaataagaatcaaaaaatagctgtagagcatgtaagtggtccatgttta
gtactagcagggcctggttcaggaaaaacaagggttatagcacataggattataaattta
gtgaaaaataaaaatgtagcaccaactagaattttggcaattagctttaccaaggcttca
tcaatggagatgaaagctagaactttgaaaatgggcgtagacaatgcttttaataaagtt
aattttggaacattccatgctacattttttagaattttaagaaaatatcaggggctaggt
ttagagagcataatatcggaaatagacagatataaattaataaaatctattttaaaacac
ttaaatataagtgattatagtgatgatgacataaatgatgttttatctgaaatttcttat
gtaaaaaatgaacttatgaattatatggattttaattctcaaatttttaataaagatgaa
tttctagaaatttatagactatatgaaaaaggaaaaaagcagtataataagatagatttc
gatgatatgttgattatgacatatgagcttttaaacacaaataatgatgtgctatcaata
gttagacaagtttttaaatatatattgatagatgaatttcaagatattaatagggttcag
tttgaaacaataaggttaatagcacaccctaataataatatttttgtggtaggtgatgaa
gaccaaagtatttatgggtttagaggagccagaccagattttatgttgaatttctcaaaa
tacttcaaaggcgcacaagaaattgttctagatacaaattataggtcaaagagaaatatt
gtagattgttctcaaggattaataaaaaataataaagatagatatgataaaaatatagta
gcaaagagcacaaatgaaggtttgattaagactatttatccaaaagatacagatgatgag
gctatatttataggaaaagaaattttaaatgttgtaaatgataaaaatgctggttttgaa
tatagtgactttgctgttatatacagaactaataggcaagcaagagcttttgtagatgca
tttttggaccttagaataccgtttgtattaaaggattctgcaaaaactatatatgatcat
tgggtttcgcttgatatattagcttatctaagaatagcgatggatattggtacaactgat
gattggattaggattattaacaaaccatttaggtatgtttcgagagattctataagtaag
gccagtaaaggtctaaacttttttgatcaattgatggaagatgatagattaaaatcatat
cagaaaaaagacttaaatgatttgctagaagatttaaattatataaaaggattagcacca
ggatatgctatatcttatattaggtctaccttggattatgatagatatattttagaatac
tgtaatcagagaaagataaaatcaaagcagatagtggaaattttggatgagattgagact
tcggcaaaggtatataaaactaatctcaaattttttgaacatattgatgaagttagagaa
gaagtaaaaattagagcaaataaaaacgctaatcaaataaactctgaaagtcaacgagat
ggtgtaatattatctactatgcatagctcaaagggacttgaatttagaaatgtatacgta
gcaggtgtaaacaaaggagtaattccatataacaacaatgatgatgaaaatatgtcaaac
tcaactttggaagaagagagaagattattatatgttacaattactagagctaaggaaaat
cttacaataagttcacctcaaaaaagattcggaagaaaaattgataagtctgagttttta
aaagaaataaaatttagctaa
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