Peptostreptococcus equinus: O0R46_01780
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Entry
O0R46_01780 CDS
T08671
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
peb
Peptostreptococcus equinus
Pathway
peb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O0R46_01780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peb03019
]
O0R46_01780
03009 Ribosome biogenesis [BR:
peb03009
]
O0R46_01780
Enzymes [BR:
peb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O0R46_01780
Messenger RNA biogenesis [BR:
peb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O0R46_01780
Ribosome biogenesis [BR:
peb03009
]
Prokaryotic type
rRNA helicases
O0R46_01780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Hyccin
Helicase_RecD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WAW15204
LinkDB
All DBs
Position
346242..347897
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AA seq
551 aa
AA seq
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MEITQFKDLEIKEELQRAIEDLGYEQASPIQAKAIPAVLSGIDVIGQAQTGTGKTAAFGI
PLLQRIDPNNKNLQAIVLCPTRELAIQVSEELRKLAKYLQGVKTLPVYGGQPIDRQIKAL
KSGVQVVIGTPGRVIDHINRRTLKTGMVNMVVLDEADEMLDMGFREDIETILSSVPEDRQ
TSLFSATMPKAILELTRKYQNNPEHIKVVRKELTVSNIKQFYIETRYSNKLEVLTRLIDV
YNPKLSVVFTNTKKGADELVSSLQARGYGADSLHGDLKQAQRDIVMDKFRSGTIDILVAT
DVAARGIDVDDVECVFNYELPQDEEYYVHRIGRTGRAGRDGLAFSFAFGREMRKLKDIER
YTKSKVMKHAIPTVNDVEQKRANQYFEEIKKILDEGNFAKHLQLVEDFLNEEDYSLIDVC
AAIVKNSLGDEEKQEIKEESSDNRRNKNRSRNDADMTRLFLNVGRKQKVQAKDILGAIAG
ETGISSNKIGSIDIYDKYSFVDVSNSAAKTIIEKMKSRKIKGNKLNIERAGKRDNTSRKR
NSNFSKKRDRM
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaaataacacaatttaaagatttagaaataaaagaagaattacagagagcaattgaa
gatttaggatatgaacaagcatcaccaatacaagcaaaggcaatacctgctgtattatca
ggaatagatgtaatagggcaggcacagacaggtacaggtaaaactgctgcatttggtatt
ccacttcttcagagaatagatccaaataacaaaaatttacaagctatagtattatgtcca
acaagagaacttgcaatacaggtgtctgaagaattaagaaagctggccaagtacctacaa
ggagtgaaaacacttccagtttatggtggacaaccaatagatagacagataaaggcattg
aaaagtggtgtacaagtagtaataggaacaccaggtagagtaattgatcatataaataga
agaacactaaaaacagggatggttaatatggtagttctagatgaagcagatgaaatgctt
gatatgggatttagagaagatattgagactattcttagttcagttcctgaagataggcag
acaagtttattttcggctactatgccaaaagctattttagaattaactaggaaatatcag
aacaatccagaacatataaaggtagttagaaaagaattaactgtatcaaacatcaaacaa
ttttatatagaaactagatattcaaataaattagaagtactgactagattgatagatgta
tataatccaaagctatcggtagtatttacaaatactaaaaaaggtgcagacgaattagta
tcaagcctacaggcaagaggttatggagcagattcattacacggagatttaaagcaggct
caaagagacatagtaatggataaatttagatcaggtactattgatattctagtagcaaca
gatgtagctgcaagaggaatagatgtagatgatgtagagtgtgtatttaactatgagtta
ccacaagacgaagaatattatgttcatagaattggtagaactggtagagctgggagagac
ggcttagcattttcttttgcctttggtagagaaatgagaaagttaaaagatatagaaaga
tatacgaaatcgaaagtaatgaagcatgccatacctacagtaaatgatgtagagcaaaag
agagcaaatcagtattttgaagaaataaagaaaattttagatgaaggtaattttgccaaa
catttacagttagtggaagatttccttaatgaagaagattattctttgattgatgtatgt
gcagccatagttaaaaatagtttaggtgatgaagaaaaacaagaaataaaagaagaatca
agcgataatagaaggaataagaatagaagtagaaatgatgctgatatgacaagattattc
ttaaatgtaggcagaaaacagaaagtacaagctaaggatatattaggtgctatagctggt
gagacaggaataagcagtaataagataggcagtattgatatatatgataaatattcattt
gttgatgtatcaaatagtgcagcgaagacaataattgaaaaaatgaagagtagaaaaatt
aaaggaaataaacttaatatagaaagagctggaaaaagagataatacttctagaaaaaga
aattcgaattttagtaaaaaaagagatagaatgtaa
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