Peptostreptococcus equinus: O0R46_03240
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Entry
O0R46_03240 CDS
T08671
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
peb
Peptostreptococcus equinus
Pathway
peb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O0R46_03240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peb03019
]
O0R46_03240
03009 Ribosome biogenesis [BR:
peb03009
]
O0R46_03240
Enzymes [BR:
peb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O0R46_03240
Messenger RNA biogenesis [BR:
peb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O0R46_03240
Ribosome biogenesis [BR:
peb03009
]
Prokaryotic type
rRNA helicases
O0R46_03240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WAW15474
UniProt:
A0ABY7JQ50
LinkDB
All DBs
Position
complement(610933..612027)
Genome browser
AA seq
364 aa
AA seq
DB search
MHFSNLKIDNNIINALSKNGIKEPTQIQSETMYPILNLNNIIAKSNTGSGKTLAFVIPIL
NLILNDKIETSLILAPTREITIQISQVIESLVNVITNIDKHPINYIAIYGGKDIKSQIKK
LNSNKINIIIATPGRLLDHIQRKTIKLDMIDTLVIDEADQMLLMGFKNEIDSIFNKINTY
KNLLLFSATINSSVKKLAYRYAENFIEIDTSKENIPNKIEQEFIISTDRSKFDDLCKQIE
KDSPFLAIIFCRTKARVDNLDIKLGQKGYSCCKIHSDISQSKRERIIKDFKNMKFQFLIS
TDLASRGLDIQGLSHIYNYDFPELAQDYIHRIGRTGRVNKDGKSRSFITEKNMLVYEEVK
KILE
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttcaaatttaaaaatagataataacattattaatgccctaagcaaaaatggt
attaaagaacccactcaaatacaatcagaaactatgtacccaatacttaatttaaacaat
attatagccaagtcaaatactggttctggtaaaacacttgcatttgtaatacctatttta
aatcttatattaaatgataaaatagaaacaagtctaatactggctccaactagagaaata
actatacaaataagccaagtcattgaaagtcttgttaatgttattacaaatatagataaa
catcctattaattacattgctatatatggtggtaaagatataaaatcccaaataaaaaaa
ctaaatagcaacaaaataaatattataatagcaactccaggaagattacttgaccacata
caaagaaaaactatcaaactagatatgatagatactctagtaattgatgaggctgatcag
atgcttcttatgggatttaaaaacgaaatagattcaatctttaacaaaataaatacctat
aaaaatcttttacttttttcagcaactataaattcaagcgtaaaaaaattagcatataga
tatgcagaaaattttatagaaatagatactagcaaagaaaatatacctaacaaaatagag
caagaatttataatctcaacagacaggtcaaaatttgatgatttatgcaaacaaatagaa
aaagattcaccatttttagctattattttttgtaggactaaggctagagttgataattta
gatataaagttaggacaaaaaggatatagttgttgtaagatacatagtgatattagccaa
tctaaaagagaaagaattataaaagattttaaaaatatgaaatttcaattcctaatctca
acagatttagcgtcaagaggtctagatatacaaggcctaagtcatatatataactatgat
ttccctgaacttgcacaggattatatacatagaatcggtagaactggaagagtaaataaa
gatggaaaatctcgttcctttattacagaaaaaaacatgcttgtttatgaagaagttaaa
aaaatattggaataa
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