Peptostreptococcus equinus: O0R46_05380
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Entry
O0R46_05380 CDS
T08671
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
peb
Peptostreptococcus equinus
Pathway
peb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O0R46_05380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peb03019
]
O0R46_05380
Messenger RNA biogenesis [BR:
peb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
O0R46_05380
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
WAW14038
UniProt:
A0ABY7JL12
LinkDB
All DBs
Position
complement(1073777..1075447)
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AA seq
556 aa
AA seq
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MTKNNNDKIKIIPLGGLNEIGKNMTVIEYRDEIIVIDAGLSFPEDELLGIDIVIPDVTYL
QKNIDKVKGIFITHGHEDHIGAMPYILKKLNVPVYGSALSIELIRVKLKEHRINNAKLNI
ISPRKQIKLKNMSVEFIKVTHSIPDAYSIAVHTDQGVIYHTGDFKIDLTPIDGQMMDIHR
ICQISDEEGILVMMADSTNADKEGSTMSEKRVGAGLDMLFKKASDSRIIVATFASNIHRL
QQITEVAKTYGRKVAVSGRSMVNIVGVAKELGYITDDENIIDLNDIHKYKDNELVIITTG
SQGEPMSALARMANAEHKKVEIKKGDLVIISAHPIPGNEKTVSKVINFLLEKGADVVSSD
IADIHVSGHARRDELKLMQAFAKPKYFLPVHGEYKMLKRHAELAKETGTKEENIFIISNG
ETFEVNANSARRGQRVTSGRILVDGLGVGDVGNIVLRDRKHLSEDGLMTIVVTLSKEDGR
ILAGPDIISRGFVYVRESEGLMDGAKDIITNIFERCEDKNIKEWAYIKNTIKEELRDYLY
IKTKRNPMILPILMEV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaaaaataataatgataaaataaaaataataccactaggcggtctgaatgaaatt
ggtaaaaatatgactgttatagagtatagggacgaaataatagttatagacgctggactt
agctttccagaagatgagctattagggattgatatagtaataccagatgttacttatcta
caaaaaaacattgacaaggtaaagggcatatttattacgcacggtcatgaggaccatata
ggcgcaatgccatatatcttaaaaaaattaaatgttcctgtgtacggatctgctttaagt
attgagttaataagagttaaattgaaggaacatagaattaataatgcaaaacttaatata
atcagtccaagaaaacagataaaattaaagaatatgtctgttgaattcattaaggtaaca
cattcgatacctgatgcttactctatagctgttcatactgatcaaggtgtaatatatcat
actggagattttaagattgatttaacacctattgatggacagatgatggatatacacaga
atatgtcaaattagtgatgaagaaggtatattagtaatgatggcagatagtactaatgca
gataaagaaggcagtactatgtctgaaaaaagagtaggtgctggactagatatgttattt
aaaaaagcatctgatagtaggataattgtggctacatttgcatctaatatacatagatta
caacagattactgaggttgcaaaaacttatggacgtaaggtagctgtatctggaagatct
atggtaaatatagttggtgttgcaaaagaattaggatatataactgatgacgaaaatata
attgatttaaatgatatacacaaatacaaagacaatgaattggtaattatcacgactgga
tcacaaggagaaccgatgtcagctcttgcaaggatggcaaatgctgaacataaaaaggtt
gaaattaaaaagggtgacctagtaataatatcagcacatccaataccaggaaatgaaaag
acagtttctaaggtgataaatttcttacttgaaaagggagccgatgttgtgtcaagtgac
attgcagatatacatgtatctggtcatgcgagaagggatgaattgaaattaatgcaggcg
tttgcaaaaccaaaatatttcttacctgtacacggtgagtataaaatgttaaaaagacat
gctgagcttgccaaagaaacaggtacaaaagaagaaaatatatttataatatctaacgga
gagacatttgaagtcaatgctaattctgctagaaggggtcaaagagttacatcaggtaga
atattagtagatggacttggtgtaggagatgtaggtaatatagttctaagagatagaaaa
catttatcagaagatggattgatgactattgttgtaacactatctaaagaagatggtaga
atattagcaggtccagatattatttctagaggattcgtatatgtcagagagtctgaagga
ttaatggatggagctaaagatataatcactaatatatttgaacgttgtgaagataaaaat
ataaaggaatgggcttatatcaaaaatactataaaagaagagttaagggattatttatat
attaagacaaagaggaaccctatgatactacctatattaatggaagtataa
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