Primulina eburnea: 140803449
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Entry
140803449 CDS
T11060
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A
KO
K12856
pre-mRNA-processing factor 8
Organism
pebu Primulina eburnea
Pathway
pebu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140803449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pebu03041
]
140803449
Spliceosome [BR:
pebu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
140803449
Complex C
U5 SnRNP specific factors
140803449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
KapB
Motif
Other DBs
NCBI-GeneID:
140803449
NCBI-ProteinID:
XP_073015429
LinkDB
All DBs
Position
10:37097001..37108862
Genome browser
AA seq
2373 aa
AA seq
DB search
MYNNGQDMWNNNMNNLTPPGTSGSGVAAGMPPPPPPPGTSGVQPVAPPPPPSLPPSYTVV
PSEVQLDERARKWMQLNTKRYSDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKFRHD
KRVYLGALKFVPHAVYKLLENMPMPWEQVREVKVLYHITGAITFVNEIPWVVEPIYLAQW
GTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVDPLEPIQLEMDEEEDSAVH
TWFYDHKPLVKTKLINGPSYRKWHLSLPIMATLHRLSGQLLSDLTDGNYFYLFDMESFFT
AKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPR
KVKLCIYHTPMIMYIKTEDPDLPAFYYDPLIHPITSTNKDRRDKKNYEEDEDDDFVLPEE
VEPLLSGTPIYTDTTAAGISLLFAPRPFNMRSGRMRRAEDIPLVSEWFKEHCPPSYPVKV
RVSYQKLLKCFVLNELHHRPPKAQKKKHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNM
LNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQ
FRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGK
GPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDL
ELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYV
KSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTP
EEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREE
LGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLD
QYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTSEGQCVVMLQTKFEK
FFEKIDLTMLNRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQY
FGLVLDLLLLGLTRASEIAGPPQMPNEFITYHDTRIETRHPIRLYSRYIDKVHILFRFTH
EEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPR
SITTLEWENSFVSVYSKDNPNLLFSMSGFEIRILPKIRMTQEAFSNTRDGVWNLQNEQTK
ERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQ
ELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRH
SKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRR
LTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDG
KLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQ
RSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLW
QKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWLMSKP
SLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYNRAKFMDYTTDNMSIYPAPTGVM
IGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPY
LSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVI
HTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNI
VIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRA
LHVNNEKAKMLLKPDKTIVTEAHHIWPSLSDEQWMKVEVALRDLILSDYAKKNNVNTSAL
TQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGDELIVTTTSPY
EQAAFGSKTDWRVRAISATNLHLRVNHIYVNSEDIKETGFTYIMPKNILKNFICIADLRT
QISGYLFGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQP
NELPQLSPQDLAAHARILSNNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGKSNT
DAASNPHGYLPTFYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVGMKYGMKLGTPR
EYYHEDHRPTHFLEFSNLEEGETAEGDREDTFA
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacaacgggcaggacatgtggaacaataatatgaataatctgacgccgccgggg
acgagtggaagcggcgtagctgcggggatgcctcctcctcccccgcctccgggaacaagc
ggagtgcaaccggttgctcctcctcctccgccgtctttgccgccatcgtacacagtggtt
ccgagcgaggtgcagcttgacgagagagcgaggaagtggatgcagctcaacacgaaacgg
tacagcgataagaggaagtttggattcgttgagacgcagaaggaggacatgcctcccgaa
cacgtgaggaaaatcattcgagaccatggtgacatgtcgtcaaagaaattccgtcacgac
aaacgtgtctatttaggagctcttaagtttgtcccacatgctgtatataaacttcttgaa
aatatgcccatgccttgggaacaggttcgtgaagtgaaggttctttaccatattactggt
gctattaccttcgtaaatgaaataccatgggttgttgaaccaatctatttagctcagtgg
ggaaccatgtggatcatgatgcgaagagagaaaagagatagacgtcacttcaagagaatg
cgctttcctccatttgatgatgaagaacccccgctggactatgctgataatatcctagat
gtggatcctttggagccaatccagttagagatggatgaggaagaagattcagctgttcat
acttggttctatgatcataaacctcttgtgaaaacaaagcttataaacggacccagctac
cgaaagtggcatctgtcacttccaattatggccacattacaccggctttctggacagttg
ctttctgatctgaccgatggcaattatttttacctttttgacatggagtcatttttcact
gcaaaggcactgaacatgtgcatacctggtggacctaagtttgaacctttgtatcgtgac
atggagaaaggtgatgaagattggaatgaatttaatgacattaataaacttatcatccgg
tctcctctcaggaccgagtacaggattgcattccctcacctgtataataatagacccagg
aaagtaaagctttgtatctatcacactccaatgattatgtacataaaaactgaggatccc
gatttacctgcattttattatgatcctcttattcacccaataacaagtacaaataaagat
agacgagataagaagaattatgaagaagatgaagatgatgattttgtcttgccggaggag
gttgaaccattactttccggaacaccgatctacactgacactacagctgctggaatttcg
cttttgtttgccccacgcccttttaacatgcgatctggtcggatgcggcgggctgaagat
atacctcttgtatctgaatggtttaaggaacactgtcctccatcataccctgttaaagtt
cgagttagttaccagaaactgttgaaatgttttgtgttgaatgagctgcatcaccgacct
ccaaaggctcagaagaagaagcacttattcaggtctctgcaagccacaaagtttttccag
actaccgaacttgattgggctgaagctggtcttcaagtttgtaagcaagggtacaatatg
ctgaatttactgatccacaggaagaatttgaactacctccaccttgactataattttaac
ttgaagcctgtgaagacccttactaccaaggaacgcaaaaagtcacggtttggtaatgct
tttcatctttgtcgtgaaattctgcgtttgacaaagcttgttgttgatgcaaatattcag
ttccggttgggaaatgtcgatgcgtttcagttggcagatgggctgcaatacattttttca
catgttggccagttaactggtatgtaccggtataaatacaggctcatgcggcagattcga
atgtgcaaagatttgaagcatttgatttattaccgatttaatactgggcctgttggaaaa
ggtcctggatgtggtttctgggcacctatgtggagggtatggttgttttttcttcgtgga
atagtgcctctcttggaaaggtggttggggaatttacttgctagacagtttgagggacgt
cattccaaaggagtggctaaaacagtgacaaagcagcgtgttgaaagccacttcgatttg
gagcttcgtgctgctgtcatgcacgatgttcttgatgctatgccagagggtattaaacaa
aataaagcaagaactattttgcagcatttgagtgaagcatggcgttgctggaaagcaaat
attccctggaaggtacctggtttacctgttcccattgagaacatgatactacgttatgtc
aagtctaaagctgattggtggacgaatgtcgctcattataatcgtgaacgtatcaggaga
ggagcaacagttgataaaactgtttgtcgaaaaaatcttggaaggttgactcgcctttgg
ctaaaggcagaacaggaacgccagcacaactacctgaaagatggcccatatgtcacacct
gaggaagcggtggcaatatacacaactactgtgcattggttggaatcaagaaaattctct
cctataccattccctccattatcttacaagcatgacacaaagcttctcattcttgctttg
gagagattgaaggaatcttatagtgttgctgtcaggctaaaccagctacaaagagaagag
ttgggtctgattgaacaagcctatgacaatcctcacgaggcattgtctcgtattaagcgt
catttgctcactcagcgtgccttcaaggaagttggcattgagttcatggatttatatagc
tatctgattccagtctatgagattgaaccacttgaaaagattactgatgcatatctcgat
cagtacctgtggtacgaaggtgataagcgccacctttttccaaattggattaagcctgca
gattcagaaccaccaccattgctagtttacaaatggtgtcagggtataaataacttacaa
ggcatttgggacactagtgaaggacagtgcgtggtgatgcttcagaccaaattcgagaaa
tttttcgaaaaaattgatctaaccatgcttaacaggcttcttcggctggttcttgaccat
aatatagctgattatgttactgcgaagaacaatgttgtcctttcgtacaaagatatgagt
catacaaactcatatgggcttatccgtggtctgcagtttgcttcttttgtggtgcagtac
tttggacttgtcttggacctcctacttcttggtcttactcgagccagtgaaattgctggt
cctccgcagatgcctaatgagtttattacataccatgacactagaatcgaaacacggcat
ccaattcggttgtactccagatacattgataaggttcatatactatttcgctttactcat
gaagaggctcgggaccttatccagcgatatctcacagagcatcctgatcccaataatgaa
aatatggttggctataataacaaaaagtgctggccaagagatgccagaatgcgactcatg
aagcatgatgtcaatctagggagaagtgtcttttgggatatgaagaaccgtctacctaga
agcatcaccacacttgaatgggagaacagctttgtatctgtctacagcaaagacaatccg
aatttgctctttagcatgtctggatttgaaattcgtattttaccgaagataagaatgaca
caagaggctttcagcaatacaagagatggggtttggaaccttcaaaatgaacagacaaaa
gaacgcactgctgttgctttcctacgggtagatgatgaacacatgaaagtgtttgagaat
cgagtaagacagattctcatgtcctctggttcaacaacatttacaaagattgtcaacaaa
tggaatacagctcttataggtcttatgacttatttccgtgaagcaactgtgcatacacag
gagctcttggatttactagtaaaatgtgaaaataaaatacagacgcgtattaagattggg
ctgaattctaagatgcctagcaggttcccaccagtcatcttttacacaccaaaggaaatt
ggaggtcttggaatgctctcaatggggcacatattgattccccagagtgaccttcggcac
agtaaacagacagacgtcggtgtgactcattttagaagtgggatgagtcatgaagaggac
cagttgattcccaatttgtatcgctacatacagccatgggagagtgagttcattgattca
cagcgtgtttgggctgaatatgcattgaagaggcaggaagcccaggcacagaacagacgt
ttaacactggaagatttggaagattcttgggatcgtggaatacctcgaattaatactcta
tttcaaaaggatcgacacacccttgcttatgacaaagggtggagagtgagaacagatttt
aaacagtatcaggtcctgaaacaaaatccattttggtggacgcaccagaggcatgatggg
aagttgtggaacttaaacaactatcgtactgatgtcattcaagctctgggaggagtcgaa
ggaattcttgagcatacattgttcaagggaacatacttccctacatgggagggtcttttc
tgggagaaagcttcaggttttgaggagtccatgaagtataagaaattaaccaatgcacaa
agatctgggctcaatcaaattcctaacagaaggtttacactttggtggtcaccaactata
aaccgagcaaacgtatatgttggtttccaagtgcagctggatcttactgggatttttatg
catggaaagataccaactcttaagatatctctgattcagatattccgtgcgcatttgtgg
cagaagatacatgagagtgtggtgatggacctttgccaggttttggatcaagagttggac
gccctggagattgaaactgttcagaaagagacaattcatccaagaaagagctacaaaatg
aacagctcgtgtgctgacattctcctctttgccgctcatagatggcttatgtcaaagccc
agtcttgtggctgaatcaaaggatgtgtttgaccaaaaagccagcaataaatactggata
gatgttcaacttcgctggggtgactatgattcccatgatattgaacgatacaacagggcg
aaatttatggattacacaacagataatatgtccatctatccagcaccaactggggtaatg
ataggacttgatcttgcctacaacttgcattctgcttttggaaattggtttcctgggtca
aaaccattacttgcccaggccatgaacaagataatgaagtcaaatccagcgctatacgta
ttaagagaacgtataaggaaagggctgcagttgtattcctcagaacctacagagccttat
ctatcatctcagaactatggggaaatattcagcaatcagataatctggtttgttgatgac
acaaatgtgtatcgagtcaccattcacaagactttcgagggaaatcttacgacaaaacct
attaatggtgcaatttttattttcaaccccagaactggtcaactctttctgaaggttatc
cacacaagtgtctgggctgggcaaaagcgtcttggtcagctggccaagtggaaaactgct
gaagaagtggctgctctggtacggtcattgcccgtcgaagaacagcccaagcagatcatt
gtgactcgcaagggcatgttggatccattagaggtccacttgcttgatttcccaaatatc
gtgataaaaggaagtgagctacagttaccgttccaggcttgcttgaagattgagaaattt
ggtgatctaatattgaaggccacagagccacaaatggtgttgtttaacatatacgatgat
tggctgaaaagtatctcatcttacacagcattctctaggctgatattgattttgcgggct
ctccacgtcaacaatgagaaggctaagatgttgctgaagcctgacaagacaattgtcact
gaggctcatcacatctggccttcattatcggatgaacagtggatgaaggttgaagttgct
ctgagagatcttatactttccgactatgcgaagaagaacaacgtgaacacgtcagcatta
acccagtctgagatccgtgatataattcttggagctgagattactccaccttcacaacag
cgacaacaaattgctgagattgagaaacaggcaaaggaggctagtcagctcactgcagtc
actactaggaccacaaatgtgcatggggacgaattaatagtcaccactacaagtccctat
gagcaagcagcatttggttcgaaaaccgactggcgagtaagagcaatatctgccacaaat
cttcatctccgggtgaatcacatatatgtgaactctgaagacattaaggaaactggattc
acgtacatcatgcctaaaaatattctgaagaactttatatgtatcgctgacctccgcact
caaatttccgggtacctttttggaataagtcctccagacaaccctcaagtcaaagagata
cgctgtattgcaatgccccctcagtgggggactcaccagcaggttcatcttccatcagct
cttcctgagcatgatttcctgaacgatttggagcctctaggatggatgcatacacaacca
aatgaacttcctcagctgtcaccccaggaccttgcggctcatgcgcggatcttgtcaaac
aacaaacaatgggatggagagaagtgcataattctgacctgcagtttcactcctggttct
tgctctttaacagcatataagttgaccccttctggatatgaatggggaaaaagcaacacc
gatgctgcgagtaacccccatgggtaccttccgactttctacgagaaagttcaaatgctt
ttgagtgatcgattcctcggtttctacatggttccggacaatggtccatggaattacaat
tttatgggggtgaaacatactgtgggcatgaaatatgggatgaaactcgggacgcctcga
gaatactatcacgaggatcatcggcccactcatttcctggagttcagcaacttggaggaa
ggcgaaactgcagaaggtgatagggaagatacctttgcttaa
DBGET
integrated database retrieval system
