Primulina eburnea: 140803516
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Entry
140803516 CDS
T11060
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pebu Primulina eburnea
Pathway
pebu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140803516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pebu03041
]
140803516
03009 Ribosome biogenesis [BR:
pebu03009
]
140803516
Enzymes [BR:
pebu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140803516
Spliceosome [BR:
pebu03041
]
Complex A
U1 snRNP components
U1 related factors
140803516
Complex B
140803516
Ribosome biogenesis [BR:
pebu03009
]
Eukaryotic type
Pre-60S particles
Helicases
140803516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
140803516
NCBI-ProteinID:
XP_073015516
LinkDB
All DBs
Position
10:38474612..38480540
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AA seq
508 aa
AA seq
DB search
MSRYDSRSADPASYRDRRSSDSGFVHKGEYDGSRSSSSSKREYEGGAQSPPRKSELDGLT
PFEKNFYAESPAVASMSESDVEEYRRRREITVEGKNVPKPVKSFGDVNFPEYVMQEIVKA
GFTEPTAIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV
LAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML
ESHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLYWSATWPKEVEQLARR
FLFNPYKVIIGSPDLKANHAIHQHVEIMSENQKYNKLVKLLEDIMDGSRILIFMDTKKGC
DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRAGKSPIMTATDVAARGLDVKDVKYVI
NYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLIKILQEAGQKVSPELVSM
GRGAPPPPAFGGGSRDRGRGYGGGRSWN
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctatgacagccgctccgccgatcctgcctcctaccgtgaccgccgcagtagt
gattcggggttcgttcataaaggggaatatgatggctctcgatcgtcatcatcgtcgaag
agagaatacgagggtggagcccagtctccacctcggaaatcggagcttgatggattgaca
ccatttgagaagaatttctatgcggagtctccggcagttgcttcgatgtctgagagtgac
gtggaggagtataggcggcggcgagagattacagttgaagggaagaatgtccccaagccc
gtcaagagtttcggcgatgttaatttccctgagtatgttatgcaagaaattgtaaaagct
ggatttactgaacctacagccattcagtctcaaggttggcccatggctctgaaggggcga
gatcttattggtattgcagaaacaggatctgggaagacccttgcttatctcctacctgct
attgttcacgtgaatgctcaaccatttttagctcctggagatggtccaattgttctagta
ttagctccaactcgcgagcttgctgttcaaatacaacaggaagctactaaatttggtgca
tcgtcgaagattaagaatacatgcatatatggtggggttcctaagggacctcaagttcgt
gatctccagaaaggcgttgaaattgttattgccactcccggtaggttaattgacatgttg
gaatctcatcatacgaacctgcgaagggttacatatctggtgttagatgaagcagataga
atgctggatatgggttttgagcctcagattagaaaaattgttgaccagattcgcccagac
cgtcaaactttgtattggagtgccacttggcccaaggaggttgaacaacttgcacgccga
ttcctttttaatccatataaagtgattattggctcgccagatctgaaagccaaccatgct
attcaccagcacgtggaaattatgtctgagaaccagaaatataacaaattggtgaagttg
ctggaggacattatggatggtagccgaattttgatttttatggatactaaaaaagggtgt
gatcagataaccaggcagctgagaatggatggttggcctgctttgtctattcatggagac
aaaagccaagcagaaagagattgggtcctgtctgaatttagggctggcaagagtcccata
atgacagctacagatgttgctgctcggggtttagatgtgaaggatgtgaaatatgtgatc
aattatgactttccgggatctcttgaggattatgttcatcgcataggcagaacaggaagg
gccggtgccaaaggcaccgcctacaccttcttcacggctgctaatgcgagatttgcgaag
gatcttattaaaattctgcaggaggctggacaaaaggtcagtcctgagcttgtatcaatg
ggacggggcgcacctcctccaccagctttcggaggcggatctcgagatcgtggaagaggt
tatggtggtggtcgttcttggaactaa
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