Primulina eburnea: 140804167
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Entry
140804167 CDS
T11060
Name
(RefSeq) nuclear cap-binding protein subunit 1-like isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pebu Primulina eburnea
Pathway
pebu03013
Nucleocytoplasmic transport
pebu03015
mRNA surveillance pathway
pebu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140804167
09122 Translation
03013 Nucleocytoplasmic transport
140804167
03015 mRNA surveillance pathway
140804167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140804167
03041 Spliceosome [BR:
pebu03041
]
140804167
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
140804167
Spliceosome [BR:
pebu03041
]
Common components
Common spliceosomal components
Cap binding complex
140804167
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
DYH2-5-8_CC
BNI5_helical
Spc25_N_drosophila
Motif
Other DBs
NCBI-GeneID:
140804167
NCBI-ProteinID:
XP_073016104
LinkDB
All DBs
Position
11:complement(6068166..6081941)
Genome browser
AA seq
862 aa
AA seq
DB search
MSSWRSLVLRIGENCSEYGGNTDYKDHLETCFGVVRRELLHSSDDILPFLLECAEQLPHK
IPLYATLVGLLNLENEDFVLNIVERIHANLQAALDVGNCNRIRVLMRFLTVLMCSKVLLP
SSLIVLFETLLSSAATTVDDEKGNSSWQACADFYITCILSCLPWGGSELVEQVPEEIDRV
LVGIQAYLSIRRHISDTGCSAFEYNDERNQDDSQKDFLEDLWDRIQDLSTKGWKADSVPR
PHLSFEPQLVSGKSHDFGPLNCPEQPNPPAEVTGITYGIQKHEAELKYPLRMRSLNIFPS
SKTEQDLQPIDRFVVEEYLLDVLLFLNGCRKECASSMVGLPVSFRYEYLMCETIFSQILL
LPQPPFKPIYYTLVIMDLCKALPGAFPSVVAGAVRALFDKIADLDMECRTRLILWFSHHL
SNFQFIWPWEEWSYVLDLPKWAPQRVFVQEVLEREVRLSYWDKIKQSVESAPVLEELLPP
KSTPNFRYSAEDADQTELSLSAELNGMVKDRLNSREIISWIESQVIPDHGPDITLRVVVQ
TLLNIGSKSFTHLITVLERYCQVIARICSDQDKQVLLLSEVSYFWRNNAQMTAIAIDRMM
GYRLVSNLAIVRWVFLPQNVDQFHVSDRPWEVLRNAVNKTSNRITDLRKEISVLKKSVVS
ASEASSKAQSYLEDAKSKPTLTLVDGEPVLAENPVKMKRLQSNVDKTKESEVSLRESLEA
KEALFARADNEIEELFIFLYKNFKNILAEPLRDTEGTLHPSHEADEMAIDEENSPAAEMD
SADERPQKSHPNGKSTRTGYNVGEKEQWCLSTLGYVKALTRQYSSEIWPHIERLDAEVLT
EDVHPLVRKAVYSGLHRPADGF
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggcggagtcttgttctccgaatcggagagaattgctcggagtatggtgga
aacactgactacaaggaccatttggagacctgttttggcgttgttcgccgtgaattgttg
cattccagtgacgatattttaccctttcttctcgagtgtgctgagcagttgccgcacaag
atacctttgtatgcaacattggttggactcttaaacttggaaaatgaagattttgtcctg
aatattgttgagaggattcatgctaatttgcaggctgctttagacgttggaaattgtaac
aggatccgtgtacttatgcgctttctgactgtactgatgtgcagtaaagttctcctacca
agttcgttaattgttttattcgaaacattattgtcgtcagcagcgacaacagtggatgat
gaaaagggaaattcctcttggcaagcttgtgccgatttttatataacatgcattttatct
tgtctcccttggggtggatcagaacttgttgagcaagtccctgaggagatagatagagtt
ttggtgggaatacaagcgtacttgagtatcagaaggcacatttccgacactggttgctct
gcatttgaatataatgatgaaaggaatcaggatgatagccaaaaagacttcttggaggat
ctatgggaccggattcaagatctttccaccaagggatggaaggcggatagcgttcccaga
ccccacctttcatttgaaccacagctggtttctggaaagtctcatgattttggccccttg
aactgccctgagcaacctaatcccccggctgaagtaacagggatcacttatggcatacag
aagcatgaagctgaattgaaatatcctctgcgtatgcgcagcctcaatatttttccttct
agtaagacagagcaggatttgcaacctatagatcggttcgttgtggaagaatatttacta
gacgtgcttttatttctaaatggctgtcgaaaggaatgtgcttcatccatggttggccta
cctgtttccttccgatacgagtaccttatgtgtgagacaatattttcccagattctctta
ttgccccaaccccccttcaagcccatctactataccttggtcatcatggatctatgcaag
gctcttccaggtgcctttccatctgttgtagcgggggctgttcgtgctctttttgataaa
attgctgatttagacatggagtgccgtacacgccttatcctttggttttcacaccattta
tctaattttcaatttatttggccatgggaagaatggtcttatgtacttgaccttccaaaa
tgggcgcctcaaagggtgtttgttcaggaggttttggaaagggaagtgcggctatcatac
tgggacaaaattaaacagagtgttgagagtgctcctgttttagaggagttacttccacca
aaaagtacgccaaatttcagatacagtgcagaagatgcagatcaaactgaactcagtctc
tccgcagagctcaatggcatggtgaaagaccgattaaattctcgtgaaattatctcatgg
attgagagtcaagtaattcctgatcatgggccggatattactctcagagtggttgttcag
actcttctcaatattggttcaaaaagctttactcatttgattactgtcttagagaggtat
tgccaggtcattgcaaggatttgttctgatcaggacaagcaagttttgctcttatctgaa
gtgagttatttctggagaaacaatgctcaaatgacagccatagccattgacagaatgatg
gggtatcgccttgtatctaatctggctatcgtgagatgggtattcttgccgcagaatgtt
gatcaatttcatgtttctgatcgcccctgggaggtcttgagaaatgcagttaacaaaaca
tccaatcgcattactgatctaagaaaagagatatcagtcctaaagaagagcgtggtttcc
gcttctgaagcttcatctaaagcacaatcttacttagaggatgcaaagtcaaagcctact
cttacccttgtggatggtgagcctgttcttgcagaaaatcctgtgaaaatgaaacgtttg
caatccaacgttgataaaacaaaggagtccgaggtttctttgcgtgaatccttagaagca
aaagaggctctttttgctcgagctgacaatgaaattgaggaactatttattttcttgtac
aaaaactttaagaacatattggcggaaccacttcgggatacagaaggtaccttgcaccct
tctcacgaggcagatgaaatggctattgacgaggaaaattctcctgcagcagagatggat
agtgctgatgaaagaccacaaaaaagtcatcccaacggtaaaagcacaagaactggttac
aatgttggtgagaaggaacaatggtgtctgtcaaccttgggctacgttaaggccctcact
cgtcaatattcttcagagatttggcctcatatcgagagattagatgccgaggtattgacc
gaggacgttcacccccttgtacggaaagctgtatactctggtctgcatcgaccagctgat
ggcttttaa
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