Primulina eburnea: 140804234
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Entry
140804234 CDS
T11060
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
pebu Primulina eburnea
Pathway
pebu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140804234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pebu04121
]
140804234
Ubiquitin system [BR:
pebu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140804234
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
DUF3630
Motif
Other DBs
NCBI-GeneID:
140804234
NCBI-ProteinID:
XP_073016205
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Position
11:5477770..5482376
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AA seq
592 aa
AA seq
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MDPDSKKSKFSPSPNLGNSKASVPLQSSLFPDELLEKVVSFIDSHKDRSSVSLVCKDWYN
AERWTRSKLFIGNCYAVSPEIVARRFPRIKSVTLKGKPRFSDFNLLPRDWGADVHSWLVM
FAKVYPFLEELRLKRMAINDESLEILAKSFPGFKALSLYCCDGFTNKGLKAIATHCRNLT
ELDIQDMATDDFSGDWLSCFPEHFSSLEILNFACLNSEIDFDKLERLVSRCSSLRVLKVN
ESISLDQLQRLLVLAPQLKELGTGSFFPELTPLQYGEVESAFSNVRNLQTLSGLWDATSS
YLPVLYGACASLSFLNLSDAALQSGPFVKLLAHCPNLRRLWVADTVEDKGLEAVGLSCPL
LEELRVFPSDPYDQHQRHGVTELGFVAVSRGCRKLHYVLYFCRRMTNAAVETIVNNCPDF
THFRLCIMNPGEPDYLTNDPMDEAFGSVVKTCTKLQRLSVSGLLTDLTFEYIGKYAKNLE
TLSVAFAGSSDHAMQCVLEGCPKLRKLEIRDCPFGNAALLSGVEKYEMMRSLWMSACNVT
MKGCKLLASEMPRLNVEVIKDEESDGFQADKVYVYRSVAGPRRDAPPFVLTL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggatccggactccaaaaagtccaaattctcaccatcaccaaacttaggcaactcgaaa
gcgtcagttccgttgcaatcatcactattcccagatgaactcttggaaaaagtcgtgtca
ttcattgattcacacaaggacaggagctcggtctccctggtgtgcaaggactggtataat
gctgaacgttggacgagatcaaagctattcataggcaactgctatgcagtgtctcctgaa
attgtggctaggaggtttccaagaattaagagtgttaccctcaaagggaagccacgattt
tcggatttcaaccttttgcctagagattggggcgctgatgtgcattcttggttggtcatg
tttgccaaagtttacccctttttggaggaattgagactcaagaggatggctattaatgat
gagagcttggagatcttggcgaaatcttttccaggcttcaaagctttgtctctgtattgt
tgtgatgggttcacaaacaaggggctcaaagctatagccacccattgtaggaatttgaca
gaactcgacatacaggacatggcaactgatgacttcagtggagattggcttagttgtttc
cccgaacacttctcctcacttgaaatactaaattttgcatgtctcaacagtgagattgat
tttgataagctcgagagacttgtcagtaggtgcagttcattaagggttctaaaggtcaat
gagagtattagtttggaccaactgcaacgtctgcttgtgcttgctcctcagttaaaagag
ctcggcactggttcctttttcccagaacttacccctctccagtacggagaagttgaaagt
gcatttagtaatgtccgaaatcttcaaactctatcgggcttatgggatgccacatcatct
tatctcccggttctttatggagcttgtgcaagcctgagtttcttgaacttgagcgatgct
gcccttcagagtggcccatttgtaaagcttctcgctcactgtcccaacttgcgacgtctt
tgggtggccgatacagtagaggacaaggggttagaggccgttggtttaagctgtcccttg
ctcgaagaactccgagttttcccttcagatccttacgaccaacatcaacgtcacggagtg
acagagttaggttttgtagccgtgtctcgtggatgtcgcaaactccattatgtcctctac
ttctgtcggaggatgactaatgctgctgttgagaccatagtaaacaactgccctgatttt
acccacttccgtctttgcataatgaatcctggagagccagattacctgacaaacgaccca
atggatgaggcctttggttctgtggttaaaacttgcactaaactccagcggctttctgtc
tcggggcttctaacagatctaacctttgagtatatcggtaaatatgccaagaatttggag
accctttctgtggcttttgccggaagcagtgatcatgcgatgcagtgtgttcttgaaggt
tgccccaagcttagaaaacttgagataagagattgcccgtttggaaatgcggctctgctt
tctggagtcgagaaatatgaaatgatgaggtctttgtggatgtcagcttgtaacgtcact
atgaaagggtgcaagctactggcaagcgagatgccaaggttaaatgttgaagtgataaaa
gacgaggaaagtgacggcttccaagctgacaaagtttacgtctaccgctcggtagcaggt
ccgagaagggacgccccgccctttgttcttactctttga
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