Primulina eburnea: 140804750
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Entry
140804750 CDS
T11060
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pebu01009
]
140804750
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pebu03021
]
140804750
Enzymes [BR:
pebu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
140804750
Protein phosphatases and associated proteins [BR:
pebu01009
]
HAD phosphatases
Fcp/Scp phosphatases
140804750
Transcription machinery [BR:
pebu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
140804750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
140804750
NCBI-ProteinID:
XP_073016962
LinkDB
All DBs
Position
11:5426616..5444479
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AA seq
924 aa
AA seq
DB search
MYCKLVTVYEGDRVLGEVELHPQNGIVFGEDFREIRISHYSQPSERCPPLAVLHTVSATG
TCFKLESSFKSQESPLSVLHATCLRDNKTAVMSIGGGEIHLVAMHSRKYEGQVPCFWGFN
VAPGLYSSCLVMLNLRCLAIVFDLDETLIVANTMRSFEDRIEALQRKISSESDPHRVSSM
VAEVKRYQDDKNILKQYAESDQVIDNGKVIKSQSEVVPALSDNHEPILRPIIRLPEKSIV
LTRINPLIRDTSVLVRFRPAWEDLRSYLTARGRKRFEVFVCTMAERDYALEMWRLLDPES
NLINSNELLDRIACVKSGSRKSLFNVFQDGSCHPKMALVIDDRLKVWHEKDQPRVHIVPA
FAPYYAPQAEANNTVPVLCVARNVACNVRGGFFKEFDDGLLQQIAEVAYEDDIKNVAFPP
DVSNYLISEDDPSTSNGNKDLHVFDGMAGTEVERRLKEEISASSTGPSQTKNLDPRIPPA
IQYTVPSTSFSVPPSTIQGLPVPFTNQQSSPVTSLLKPPLTQLGQAESTFHIAPVTEEGE
VPESELDPDTRRRLLILQHGQDMRGHTPSESRFPARPPMPVSVPAVQPHGWFPVEEEISP
GHLNQVAPNKEFPLNAESLPIDHHRVHHPPFLHKVEPSIPPGRALENQRLSKEVLPREDL
LRLNQQLPGFHSFSDEGGPRRPQPSLVNKDLDLEAGQIDPYPETSTGALQDIALKCGTKV
EFNQALSPILELQFAVEVLFAGQKIGEGIGRTRREAQRQATEVSLMNLADKYLSNLEPEF
SYTTGNEVSPRIHDARVENSKKSMGSIAALNELCMKEGLGVAFQTQPQFSANPSLKNEVY
AQVEINGQLMGKGIGRTWDEAKSHAAERALGALNSMVGQFPHRHHGSPASLQGLSSKRLK
SDFSRVVQHTPLSTRYPKNASPIP
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtaaattggtgacggtgtatgaaggagacagggtgctgggagaagtggagttg
caccctcaaaatgggattgtatttggggaggactttagggaaattcggatatcgcactat
tcacaacccagtgagaggtgcccgccactcgccgtgcttcacactgtatccgcaactgga
acatgcttcaaattggaatcttcctttaagtctcaagaatcgccgctttctgtattgcat
gccacttgcctcagagataacaagactgctgtaatgtcaattggaggaggggaaattcat
ttagttgccatgcattctaggaagtatgaagggcaggtaccttgtttttgggggttcaat
gttgctccgggactttacagttcttgtcttgtcatgctgaatcttagatgtcttgccatt
gtgtttgatcttgatgaaactctcatcgttgcaaacacaatgcgttcttttgaggacaga
atagaggcattgcagagaaaaataagctctgagtctgatccacaccgtgtttctagcatg
gttgcagaggtcaaacgttatcaggatgataaaaatattttgaagcaatatgcagaaagt
gatcaggtgattgataatgggaaggttatcaaatcacagtctgaagtggttccagcattg
tcggacaatcatgagcctattcttcgtccaattatacgactaccagaaaagagcatcgtt
ctgactcgcataaatccactgattcgagacaccagtgttctcgtgagatttagacctgct
tgggaggatcttagaagctatttgactgctagaggtcgaaagcgctttgaggtttttgtt
tgtactatggctgaaagagattacgcattagaaatgtggaggcttcttgacccagagtca
aatttgataaactctaatgagctcttggatcgaattgcttgcgtcaaatctggttctagg
aaatcactatttaatgtatttcaagatggaagttgtcatcctaagatggcattggtgatt
gatgaccgtttaaaagtgtggcatgagaaagatcagcctcgagtgcatatagttcctgca
tttgctccttattatgctcctcaagctgaagccaacaacaccgtacctgtgctttgcgtt
gcaagaaatgtggcctgcaatgttagaggtggattcttcaaagaatttgatgatggtctc
ttgcaacaaattgctgaagttgcatatgaagatgatattaaaaatgtggctttcccacct
gatgtgagcaactacttgatttcagaggatgatccttcaacctctaatggaaacaaggac
ttgcatgtttttgatggaatggctggtactgaggtggaaaggaggctaaaggaggaaatt
tctgcttcttcaactggtccttcgcagacaaagaatttggatccaagaattcctccagct
atccagtacacagtaccatctacttctttttcagttcctccatcaacaattcaagggctg
ccagtgccttttaccaatcagcaatcatctccagtgacctctttgcttaaaccaccatta
actcaacttgggcaagcagaatcaacttttcacattgctcctgtaacggaagagggtgag
gtaccggagtctgaattagatcccgatacaaggaggaggctgctcattttgcaacatggt
caagacatgagaggccacactccatctgaatctcggtttcctgcccgacctcccatgcca
gtttctgttccagcagttcaaccacatggttggtttccagttgaagaggagataagcccg
ggacacctcaaccaagtggcgccaaataaggagtttcctttgaatgcagagtctcttcct
attgaccaccaccgggttcatcatccgccatttctacacaaagtggagccttctattcca
cctggtagagctcttgaaaaccaaaggttgtccaaggaggtgcttcccagggaagacctg
ttaaggttaaaccaacagctgcctggttttcattccttttctgatgagggtggtcctcga
aggcctcaaccatctttggtaaacaaggatctagatcttgaagcaggacagattgacccc
taccctgaaacgtctactggagctttgcaggacattgcattgaagtgtggaacaaaggtc
gagttcaatcaagctctatcaccgatcttagaactgcaattcgctgtggaggttttgttt
gcagggcagaaaattggtgaaggaattggcagaacaagacgggaagcacaacgtcaggct
actgaagtatctcttatgaacttggctgataaatatttatcaaatcttgaacctgagttc
agctacacgactgggaatgaggtgtcaccaaggattcatgatgcaagagttgagaactcc
aagaagtcaatgggttcaatagctgcacttaacgaattatgcatgaaggaaggacttggt
gtagcgtttcaaacccaacctcaattttcagctaaccctagcctaaaaaacgaggtgtat
gctcaggttgaaatcaatggacagttgatgggaaagggaattggtcgaacatgggatgaa
gctaaatcacatgctgctgaaagggctcttggggccttgaattccatggttggccaattt
cctcacagacaccatggttctccagcatctttgcagggcttgtcaagcaaaaggttaaaa
tcagatttctctagagttgtccaacacacaccattgtctacccgataccctaagaatgca
tctcctataccatga
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