Primulina eburnea: 140805005
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Entry
140805005 CDS
T11060
Name
(RefSeq) prolycopene isomerase, chloroplastic-like
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
pebu Primulina eburnea
Pathway
pebu00906
Carotenoid biosynthesis
pebu01100
Metabolic pathways
pebu01110
Biosynthesis of secondary metabolites
Module
pebu_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
140805005
Enzymes [BR:
pebu01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
140805005
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GDI
GIDA
HI0933_like
Thi4
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
140805005
NCBI-ProteinID:
XP_073017286
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Position
11:978478..983596
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AA seq
630 aa
AA seq
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MGSVWALTSRAPTRDMLDFGFPNSDRFSTNSKSNPLFGIGDQKPRNLCQNAFRFNSLKTQ
NCCDHQLLKLKFGGGMAKQVKRFYLFRLKAGVEADKTVEDVGSLVGDAHSSFYDAIVIGS
GIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGFYQRDGFTFDVGSSVMFGFSDKGNLNLI
TQALEAVGCKMQVIPDPTTVHYHLPNSLSIQVHKEYDEFIAELVSKFPREREGILKFYGD
CWKIFNALNSLELKSLEEPIYLFGQFFKKPLECLTLAYYLPQNAGNIARKYIKDPELLSF
IDAECFIVSTVNAMQTPIINAAMVLCDRHFGGINYPVGGVGEIAKSLAKGLVNQGSEILY
KANVTNIMIENGKAVGVNLSDGRQFFAKTIISNATRWDTFGKLLKLEDLPEEEARFQRSY
IKAPSFLSIHMGVKADVLPPNTDCHHFILEDDWKNLEEPYGSVFLSIPTVLDSSLAPEGN
HILHIFTTSSIEDWEGVSRKVYETKKELVSEKIISRLEKKLFPGIKSSIVFMEVGTPKTH
RRYLARDSGTYGPMPRGTPKGLLGMPFNTTAVEGLYCVGDSCFPGQGVIAVAFSGVMCAH
RVAADIGFEKKNIVLDVTLLRLLGWLRTFA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgggatcggtctgggctctgacaagtcgagcgccaactagggatatgttggattttggg
tttccgaattctgaccggttcagcactaatagcaagagtaatcctttgttcggcattggc
gaccaaaaaccaagaaacctatgccagaatgcatttcgttttaactcgttgaagacccag
aattgctgcgatcaccagcttcttaagttgaaatttgggggtgggatggctaaacaggtg
aaaagattctatctttttaggttaaaagcaggcgtagaagcagataaaacagtggaagat
gtgggtagtcttgttggtgatgcacatagttctttttatgacgctattgttataggttct
ggaattggtggattggtggcagctactcagctggctgtgaaaggtgccaaagtcttggtt
ctggagaagtacgtgattcctgggggaagctctgggttttaccagagggatggattcact
tttgatgttggttcatcggtgatgtttggtttcagtgataaggggaatcttaacttgatt
actcaagcactggaagctgttggatgtaagatgcaagtgatacctgatcctaccactgtt
cactatcatttacccaacagcctttccatccaagtacacaaagaatatgacgaatttatt
gcggaacttgtcagtaaatttccccgcgagagagagggaattcttaaattttacggtgac
tgctggaagattttcaatgcgttaaattcactggaattgaaatccttggaggagccaatc
tacctgtttggacaattttttaagaagccacttgagtgcttgactctagcttactatctg
ccccagaatgcgggtaacatagctcgaaagtacatcaaggatcccgagttgctgtccttt
attgatgcagagtgtttcatagtcagcactgttaatgctatgcagacaccaataatcaac
gcagccatggttttgtgtgacagacatttcgggggaatcaactatcccgtgggaggagtt
ggagaaatcgccaagtcattagcaaaaggcttggttaaccaggggagtgagatactatac
aaggcaaatgtaacaaatattatgatcgaaaatggaaaagcagtgggggtgaatctgtca
gatgggaggcaattctttgcaaagaccataatatcgaatgctactagatgggatacattt
ggcaagctcttaaaactggaagatttaccggaagaagaagcaagatttcaaagatcatat
attaaagctccatcgtttttgtctatacatatgggagttaaagctgatgttttgccacca
aatactgactgtcaccattttatccttgaggatgattggaaaaatttagaagaaccttat
ggaagtgtatttttgagcatcccaaccgttcttgattcatcgttggctccagaaggaaac
cacattcttcatattttcacaacttcttccatagaagactgggagggcgtatctcggaaa
gtctacgagacaaagaaggaacttgtgtccgaaaaaataataagcaggctcgagaaaaaa
ttgttcccagggatcaagtcatcgattgtttttatggaggtagggacacctaagacacat
aggcgatacctggctcgagatagtggcacatatggtccaatgcctcgtggtactccaaag
ggattattaggaatgccatttaacacaactgccgtagagggtctgtattgtgtgggcgat
agttgctttccaggtcaaggcgttatagccgtagctttttctggagtaatgtgtgcacat
cgagtagcagctgatataggatttgagaagaaaaatatcgtacttgatgtcactcttctt
cgattacttggttggttaaggacatttgcatga
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