Primulina eburnea: 140805659
Help
Entry
140805659 CDS
T11060
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pebu Primulina eburnea
Pathway
pebu00040
Pentose and glucuronate interconversions
pebu01100
Metabolic pathways
Module
pebu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140805659
Enzymes [BR:
pebu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
140805659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
140805659
NCBI-ProteinID:
XP_073018016
LinkDB
All DBs
Position
11:complement(42757710..42760223)
Genome browser
AA seq
432 aa
AA seq
DB search
MEKYIHIYLSVSLCVVSYFVSVDHALCYAGETNRFSQITQFLTANRRNDTFRRHDENVFN
VLDYGARGDGSSYDTEAFLAAWAATCKASGGVMVVPAGYTFLLQPIIFNGYKCKPNVVVQ
VDGKIVASSKKVDWKKNVTQWILFRECKKGLTIRGNGGVFDGHGEVWWDPDRDFGRLFAP
HAVSISNCFKVTVTGITIQNSPRMHIYFEDSQQVNVFNFTVSSPGNSPNTDGIHLSRSQH
VEIHDSTLACGDDCISIQTGCSDIKVYQVNCGPGHGYSIGSLGRYETEALVSDITIYDSN
VQNSMTGVRIKTWEGGSGSVRNVTFSNITMSDVKTPITIDQHYCEGHKACKDDTSAVAIT
GITYQNITGTYTHTSVSLLCSEHEPCKNLIVAGVDLKPSKTKGSHEGPYCSNAYGEVLTE
TLPSLRNCLQSL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatacatccacatatatctaagcgtctcgctttgtgtcgtctcgtattttgtt
tcagtagaccatgcactttgttatgctggagaaaccaatcgttttagccaaataacacaa
tttttaacagcgaacagacgaaatgatacgtttcgaaggcatgatgaaaacgtttttaat
gtactggactatggtgctcgtggcgatggatcctcgtatgacactgaggcttttcttgct
gcatgggcagcaacatgcaaagctagtggaggggtgatggttgtgccagcggggtataca
tttctacttcaacccataatttttaatgggtataaatgtaaacctaacgttgtcgtccag
gtggatgggaaaatcgtcgcttcttcaaaaaaagtggattggaagaaaaatgtgactcaa
tggatcttatttcgagagtgtaaaaaagggttaactataagaggaaacggcggcgtattt
gacggacacggcgaggtttggtgggatcccgatagagattttggccggttgtttgcacct
catgcagtgagtatttcgaattgttttaaggtgacagtaacaggaatcacaatacaaaac
agtcctcgtatgcacatttattttgaggactcccaacaagttaatgtgttcaatttcacc
gtctcctctcctggaaatagccccaacacagatgggattcacctctcacgcagccaacat
gttgaaattcacgactccactctcgcttgtggagatgattgtatttcgatacagacaggg
tgttccgatataaaagtataccaggtgaattgtgggcctgggcatggatacagcatcggg
agtctaggacgttatgagacagaagctctggtttcagacatcacaatttatgattcaaat
gtacaaaactcgatgacgggagtaaggataaagacttgggagggtggctcagggtcggtg
cgtaatgttacattctcgaacattacgatgtcagatgttaaaactccgatcaccatagac
caacactactgtgaaggacacaaggcttgcaaggatgacacctcagcagtagcgataact
ggcataacctatcagaatataacagggacatatacccacacatccgtttctcttctgtgc
agcgagcacgagccatgcaaaaatttaattgtggcaggtgttgacctaaagccttcaaaa
accaagggaagccatgaagggccatattgttcgaacgcatatggagaagtacttaccgaa
acattgccatctttacgtaattgtttgcagtctctttga
DBGET
integrated database retrieval system
