Primulina eburnea: 140805879
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Entry
140805879 CDS
T11060
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
pebu Primulina eburnea
Pathway
pebu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
140805879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pebu03400
]
140805879
DNA repair and recombination proteins [BR:
pebu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
140805879
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
140805879
NCBI-ProteinID:
XP_073018334
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Position
11:complement(38800055..38814068)
Genome browser
AA seq
1085 aa
AA seq
DB search
MAARQPRNTKVADSFIWAPKLSREIIAKPASPAPDPKMQRQKSILSFLKPQNSGGGKDVS
GGGTSLEKMPRQALAEDGGTVATPSVFSSIKHKFLRSEGRINASTDCRFKEDETSIIQSL
TDKYRGQEDIGNGYLGPKHLNKHNEFNASKTISSNGKKWCSSETRKEDIIVPEKSGTRPV
VPGLKRVQESLFNCKENADVPASSCNKKQKILTTTDSGTKDHNDDFKLISKFEWLHPSRI
KDANGRNIGDPLYDKRTLYIPPDALSRMSASQRQYWNVKCQYMDTVLFFKVGKFYELYEL
DAEIGHKELDWKMTLSGVGKCRQVGISESGIDGAVQKLIARGHNVGRMEQIETSDQAKSR
GTTSVIQRKLVRVISPATNDDNIGPDAVHLLAIKENGSTGFGFAFVDCAALKFWVGSISD
DISCAALGALLVQVSPKEIIYEKQVLSNEAQRTLEKYSVTGLSASQLTPADAFGEAMEVK
NSIVSNRYFSGSCDSWHSVLDGVAQHNLALSALGGLINHLARLMLNDIIRNGDISSYQVY
GGCLRMDGQTLVNLEIFSNNADGSNSGTLYKYLNNCITSSGKRLLRNWICHPLKDVEKIN
HRLDVVEDLIANSEVVLQIFQSLRKLPDLERLLGCIKSSIQSSALLSLPLIGSKILKKRV
RVFGLLIKGLRAGMDMLMAIQDQGHLTSLSKVVALPMLRGSEGLDKFLVQFEGAIDSDFP
NYQNHDVRDSEAETLAILMELFIEKVAQWSQVIHAINNIDVLRSFAVAAINSAGAMCRPV
LFPQSKFLNPAIEGMHPLLETKGLWHPYALGENGGIPVPNNIHLGGNGRVPCTMLLTGPN
MGGKSTLLRATCLAVILAQLGCFVPCEMCALSVVDIIFTRLGATDRIMTGESTFLIECTE
TASVLQNASQDSLVVLDELGRGTSTFDGYSIAYAVFRQLVETVHCRLLFATHYHALTKEF
SGHPLVTLQHMACSFSSNNKNELVFLYRLTSGACPESYGMQVALMAGISEQVVESATKAA
QIMKKKIGKSFELCEKRGNFSTLHEEWLKSLICMSYTKEINSDDDTFDALICLWHEVKSS
FKVIT
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacgacaaccacgtaatactaaagttgctgattcgttcatttgggcgccaaag
ttgtctcgtgaaataatagcgaagcccgcctctccagctcccgacccaaaaatgcagcgg
caaaaatctatactctcgtttctaaaacctcagaactccggcggaggaaaagatgtctct
ggtggaggcacctcgctggagaagatgccacggcaggccttggctgaagacggcggcacc
gtcgccactccatcggtcttctccagcattaaacacaaattcctgagatccgaaggccga
atcaacgcttcaactgattgcagattcaaagaggatgaaacttctattattcaatctctc
actgataaatatcgtggacaagaagatataggcaatggatatttaggtcccaagcatctt
aacaaacacaacgaatttaatgcaagcaaaacaatcagctccaacgggaaaaagtggtgt
tcctctgaaactagaaaagaagatattattgttccagaaaagtcgggaacgagaccggtt
gtcccgggtttgaagagagtccaggagagccttttcaattgcaaggaaaatgctgatgtt
cctgcttctagttgtaataaaaaacaaaagattctaacgactacggatagtggaaccaaa
gatcataatgatgactttaaacttatcagcaagttcgaatggctccatccctctcggatc
aaggatgccaatggaagaaatattggtgaccctttatatgataagaggacactttacatt
cctcctgatgctttgagtagaatgtcggcatcgcaaagacagtattggaatgtcaaatgc
cagtacatggacacggttctcttctttaaagtgggaaaattttatgagctatatgaatta
gatgctgaaattgggcacaaggaacttgattggaaaatgacactaagcggtgtgggaaaa
tgtcgacaggtcgggatatctgagagcggaatcgacggtgcggttcaaaagttgatagcc
cgtgggcacaatgttggccggatggaacaaatagagacatcagatcaagcaaaatcacgg
ggcactacttctgtcattcaaaggaaattagttagagtaatctcacccgcaacgaatgat
gacaatattgggcctgatgctgttcatcttcttgccataaaagagaatggttcaactgga
tttgggtttgcattcgtcgactgtgctgctttaaaattctgggttggctccataagcgat
gatatatcatgtgctgctttgggggctttattagtgcaggtatctccaaaggaaatcatc
tatgaaaaacaagtattgtcgaatgaagctcagagaacacttgagaagtatagtgtgacg
gggttgtctgcctcacaattgactccggctgatgcttttggtgaagctatggaagttaaa
aattctatcgtgtccaatagatactttagtgggtcttgtgattcatggcattctgtcctt
gacggagtagcacagcacaaccttgcattatccgctcttggtggacttatcaatcatcta
gcacggttgatgttaaatgacatcattcgcaatggagatatttcatcttatcaagtctat
gggggttgtcttcggatggatggtcagacacttgtgaaccttgagattttcagtaataat
gctgatggaagtaattcaggcacactgtacaaatatcttaataattgcataacatcttct
ggtaaacggcttttaaggaactggatatgccacccacttaaagatgtggagaaaataaat
cacagactagatgttgttgaggacttgattgcaaattcagaagtcgtgttacaaattttc
caatctctccgaaagcttccagatttagaaaggttacttggatgcataaagtctagcatt
cagtcttctgctttactctcgttgcccttaattggcagcaagatattgaaaaagcgagta
agagtgtttgggttgctcataaaaggactaagagccggaatggacatgttaatggccata
caagatcaaggacacttgacctcattatcaaaagtggtagcccttcctatgctgagaggc
agtgaagggcttgacaagtttcttgttcagtttgaaggagcaatagatagtgactttcca
aattaccagaaccatgatgtgagagactcagaagctgaaaccttggcaattttgatggag
ttgttcattgagaaggttgctcagtggtctcaagtcatacatgcaataaataacatcgat
gtactgagatcttttgcagttgcagcaattaattctgctggagcgatgtgtagacctgtt
ctttttcctcagtctaaatttcttaatcctgccatcgaaggaatgcatcctcttcttgaa
actaaagggctgtggcatccttatgcccttggcgaaaatggggggataccggtgccaaac
aatatccacctcggaggaaatggaagagttccttgtactatgctattgactggtccgaat
atgggcggaaaatcaacccttttacgtgcaacttgtcttgctgttatactggcacagcta
ggttgttttgtgccatgtgaaatgtgcgctctttcagttgtagacataatattcacacgg
cttggtgcaacagatcgaattatgactggcgagagtacctttctcattgagtgcacagag
actgcatctgtcctgcaaaatgcctcgcaggactcacttgttgttcttgatgagttgggt
cgaggaacaagtacttttgatggatactctatcgcatatgctgtatttcgccaactcgtt
gagacagtccactgccgtttgctgtttgccactcattatcatgctctcacgaaggagttc
tctggtcatcctcttgttaccttgcaacatatggcatgtagtttcagttcaaacaataaa
aatgagctcgttttcctctatcggctcacatctggagcatgcccagaaagctatggaatg
caagtagctctcatggctgggatttccgaacaagtggttgaatcagccactaaggctgca
caaattatgaagaaaaagattggaaaaagtttcgagttatgcgagaaaaggggtaacttt
tcaacgttacatgaagagtggctcaaatctttaatttgtatgtcttacacaaaggagatc
aattcagatgacgacaccttcgatgctctaatttgcctgtggcatgaagttaaaagttca
tttaaggtgatcacctga
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