Primulina eburnea: 140806251
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Entry
140806251 CDS
T11060
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 2-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pebu Primulina eburnea
Pathway
pebu04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
140806251
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pebu04040
]
140806251
Ion channels [BR:
pebu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
140806251
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Motif
Pfam:
cNMP_binding
Ion_trans
IQ
Motif
Other DBs
NCBI-GeneID:
140806251
NCBI-ProteinID:
XP_073018898
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Position
11:42172192..42175501
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AA seq
706 aa
AA seq
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MASHTPDPRFFLSRWFGLFRRDSVQPSSSDDGEDNQISGGAGECYACSTQLGAPVFHSTS
CDRADKPEWEASAGSSFIPIKNRXRAKPETPGPMPGRLRAFGRVLDPRSKRVQRWNRAIL
LARGVSLAVDPLFFYALSVGRGDSPCLYMDGSMAVIVTVLRTCVDGVHLFHLWLQFRLAF
ISRESLVVGCGKLVWNARAIAAHYLRSFGGFWFDVFVILPIPQAVFWLVVPRLIKEERIK
LIMTILLLIFLFQFLPKVYHCISLMRRMQKVTGYIFGTIWWGFGLNLLAYLIASHVAGGC
WYVLAIERVASCLQHHCSRTNSCNLPLSCSAEVCYQFILSSGTVANPCGSNTTVFVRKPL
CLDVNGPYRYGIYGWALPVVSSNSVSVKILYPIFWGLMTLSTFGNDLEPTSNWSEVMFSI
CNVLSGLMLFTLLIGNIQVFLHAVMAKKRKNQLRCRDMEWWMKRRQLPTLLRQRVRRYER
QRWTALDGDDEMDLISYLPDGLRRDIKRFLCLDLVKKVPLFDSLDDLILDNICDRVKPLV
FSKDEKIIREGDPVQRMVFIVRGRAKSSQNLSRGMVATSLLEPGGFFGDELLHWCLRRPF
MDRLPACSSTFTCIESIEAFALDSKDLRYITDHFRYKFANERLKRTARYYSSNWRTWAAV
NIQLAWKRYMQRNNLYALSPGSGDDDRRLRQYAAFFLSIRPHDHLE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcatactccagacccccgtttctttctctcaaggtggtttggattattccgg
cgagattctgttcaacctagcagcagcgacgacggtgaggacaatcaaatatcgggcggc
gctggtgaatgttacgcgtgtagtactcaattgggagcccctgttttccactccaccagc
tgcgacagagccgacaagccggagtgggaggcgtcagcgggttcttccttcatcccgata
aaaaaccggnnccgagcaaagcccgaaacacccggcccgatgcctggccgactgagagca
ttcggaagagtgttggacccccggagcaaacgtgtgcagcgatggaaccgagcgattctg
ttggcgcgaggggtgtcgctggcggtagaccccctgttcttctacgcgctgtccgtcgga
cgcggcgactcgccttgtctgtacatggacggaagcatggctgttatcgtgacggtactg
cgtacctgcgttgatggggttcacttattccatctgtggctgcagtttcggctggctttc
atctcgagggagtcgctggtcgtcggctgcgggaagctcgtgtggaacgcgcgcgccatc
gctgctcactacctgcggtccttcgggggattctggtttgatgtttttgtgattcttccc
attcctcaggctgtattttggttagtggtgccaagattaatcaaagaggagaggataaag
cttataatgacaattctcttactgatcttcttgttccagttcctccctaaggtctatcac
tgcatatctctaatgagaagaatgcaaaaggtgacaggctacatcttcggcacaatttgg
tggggtttcggccttaatcttttggcatatttaatcgcttctcatgtcgcaggtggatgt
tggtatgttcttgctatagagcgtgtagcatcttgcctacaacatcattgtagccgaacc
aattcgtgcaatctacctctgtcgtgctctgcggaggtttgttaccagtttatactgtcg
tccggtactgtggcgaatccttgtgggagtaacactaccgtgtttgtcagaaagccgttg
tgcttggatgtaaatgggccgtatcgctatgggatatatggatgggctcttcccgtagta
tccagcaactcggtttctgtcaagattctttatcccattttctggggattgatgactctt
agcacttttgggaatgacttggagccgacgagcaattggtccgaagtaatgttcagtata
tgcaacgtgcttagtggattgatgttattcactctgttgataggaaatattcaggtgttt
ctgcacgcggttatggcaaagaagagaaagaatcagctgagatgccgagacatggaatgg
tggatgaagagaagacaattgcccacgctacttaggcaaagagttagacgttatgaacga
cagagatggacagccttggacggcgacgatgagatggatttgatttcctacttaccagat
ggacttaggagggacattaaacgatttctttgccttgatctggttaaaaaggttccctta
tttgatagcttggacgatctcattttggacaacatatgcgaccgtgtgaagccacttgtt
ttctccaaagacgaaaagataatacgagagggagaccccgtgcagcggatggtgttcatt
gtgcgtggccgtgcaaaaagcagccaaaatctcagcagagggatggtagccacgagcctg
ctagagcccggtggattctttggggacgagcttttacattggtgccttcgccgccctttt
atggacagacttcctgcctgttcttcaacatttacatgcattgaatcgatcgaagcattt
gctctagactccaaagatcttcgctacatcacggaccattttcgttacaaattcgccaac
gagaggctcaagcgaactgcgaggtactattcctctaattggaggacatgggctgccgtt
aatatccagttggcctggaagcgttacatgcagaggaacaatctttatgcccttagtcca
ggcagtggcgatgatgacaggcggcttcggcagtatgctgccttctttttgtcgattcga
ccacatgatcatctcgaatga
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