KEGG   Primulina eburnea: 140806961
Entry
140806961         CDS       T11060                                 
Name
(RefSeq) WD repeat-containing protein PCN-like isoform X1
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
pebu  Primulina eburnea
Pathway
pebu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pebu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    140806961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pebu03009]
    140806961
Ribosome biogenesis [BR:pebu03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    140806961
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_SPT8 WDR90_beta-prop_4th PEP5_VPS11_N
Other DBs
NCBI-GeneID: 140806961
NCBI-ProteinID: XP_073019632
LinkDB
Position
12:694148..700604
AA seq 817 aa
MLKVHRSSSVEWNPSPVVALATSADGSQVAAARADSSLEIWLVSPGSVGWHCQLTIHGDP
NTRVSSLVWCHSGPTGASLGRLFSSSIDGSISEWDLFDLRQKRVLDSIGISIWQIAAEPC
YDLLFNAKQEINSHENGHTSSINSCLDEEESSESEDDNDDKDAIEHHEDSDAKCTHLAAA
CDDGCVRVYGVSDAEKLTYNRTLPRVGGRTLSVAWSPDASRIYSGSSDGFIRCWDAKLAH
EIYRITVSIGGSGSGSDLCIWYLLALRCETIVSADSSGSVQFWDSQFGTLLQAHTYHKGD
VNALAATPNHNRVFSTGADGQVILYKLSNGAVGSCDGRSSAVKKWTYIRGVRAHTHDVKA
LTVAVPINHDADLPPEEKVKRSRGKEKSHFSYHEWAHLGVPMLISAGDDTKLFAYSAMMF
DKFSPHDICPAPQRMPMKLVMKTVFNQTPLLLIQAAHWLDIYCVRLENCSVSDISPGPSG
GLATTDLVARVKCKASRKITCSTISSSGTSFAYSDHVKPNLFELKRSKSGRSVWTVNKRQ
LPVEIPFAHCMIFSSDSSRLLLAGQDRRIYVVNVGSAEVVHVFTPCSKDDVEELPPCEPP
ITKMFTSIDCQWLAAINCLGDLYIFNLETLRQHWFLSRLDGASVTAGGFTPQNSNILIIS
TSSNQVYALDVEAKQLGEWSIQHTFSLPRRYQEFPGEVIGLSFPPSSSSSVIVYSPRAMC
LIDFGLPVDRDDDVEFANDQGLTRKLHSNGVLKHKRKVHELETKHGGRKNFEICPFRDPV
LFVEHLSKNSLLVIDKPWIQVVKTFDTQPVHRHIFGT
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgcttaaagtccatcgaagcagttcggtggagtggaatccatcccctgtcgttgcccta
gccaccagcgcagacggctctcaggtcgccgccgcacgcgccgacagctctcttgagatt
tggctggtgtccccaggctccgttggttggcactgtcagcttaccattcacggggacccc
aatacgagagtttcatctctggtgtggtgtcattccgggccgacaggtgcatctctgggt
cgactgttctcgtccagcatcgatggctctatttccgaatgggatttgtttgatttaaga
caaaagagggttctagattcgatcgggatctcaatatggcaaattgctgctgaaccatgc
tatgatttgctcttcaacgcgaagcaggaaattaattctcatgaaaatggtcacaccagt
tcaattaatagttgcctcgatgaagaggagagtagtgaaagtgaagatgacaatgacgac
aaggatgctattgagcatcatgaggatagtgatgctaagtgtacccatctagcagctgct
tgtgatgatggctgcgtgcgagtttatggtgtttcagatgccgagaaacttacttacaac
aggacgttgccaagggtcggtggacgcacattaagtgtggcatggagtcctgatgccagc
aggatttattcagggagtagtgacggattcataaggtgttgggacgctaagctagctcat
gagatctacagaataactgtttcaattggaggttccgggagtggaagtgatctttgcata
tggtatttgcttgcattgagatgtgaaaccatcgtcagtgcggatagttctggtagtgtg
caattctgggacagtcaatttgggacgcttcttcaggcacatacttatcataagggtgat
gtaaacgccttagcagcaactcctaaccataacagagtgttctccactggtgctgatggt
caggtgatactttataaactttccaatggtgctgttgggtcttgtgacgggaggtccagc
gctgtcaaaaaatggacatatattcgcggtgtaagggctcatacacatgatgtcaaggca
ttgactgtagcagtacctattaaccatgatgcagatctacctcctgaggaaaaggttaaa
aggtcacgtggcaaggaaaagtcacatttcagttaccatgagtgggctcatttgggtgtg
cccatgcttatctcagctggcgatgacactaaactattcgcatactctgctatgatgttt
gacaagttttctccccatgatatatgccctgcaccacagagaatgcccatgaagctagtg
atgaaaactgttttcaatcaaacaccattgcttttgatccaggctgctcactggttagac
atttattgtgtgcgattagaaaattgttctgtctccgacatcagccctgggccgtctggt
gggcttgcaaccacagatttagtggcgcgagttaaatgtaaagcttctcgaaagatcaca
tgcagtacaatttcttcatcaggcacgtcatttgcctactccgaccatgtgaaacctaat
ttatttgaattgaaaagaagtaaatctggcaggagtgtgtggacagtaaataaaaggcag
cttcctgtggaaataccatttgcccactgcatgatatttagttctgattcttcacgtttg
ttattagctgggcaagatagaaggatatacgttgtaaatgtgggaagtgcggaggttgtt
catgtctttactccgtgttccaaagatgatgttgaggaattgccgccttgtgaacctccc
attacaaaaatgttcacgagtattgattgtcagtggctagctgccatcaactgcttggga
gatttatatattttcaatcttgaaacattgaggcaacactggttcttatcaagattggat
ggggcctctgttacagctggtggttttacgcctcaaaatagtaatattcttatcatttcc
acctcatcaaatcaagtttatgcattggatgtggaggccaaacagttgggcgaatggtcc
attcagcatacattttctctgcccagaagatatcaggaatttcctggagaagtgattggt
ctttccttcccaccatcctctagttcttctgttattgtctacagtcccagggcaatgtgc
ttgattgattttgggttgcctgttgatagagacgatgatgttgagtttgcaaatgatcaa
ggattaacgagaaagctacacagcaatggggttctaaagcataagcggaaagttcatgaa
ttagaaactaaacacggtggtagaaaaaattttgaaatttgtcctttcagggatcctgtt
ttatttgtcgaacatctttcaaaaaattctctcttggtcatagacaaaccatggatacaa
gtcgttaagacttttgatactcaacctgttcacagacatatttttgggacatga

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