Primulina eburnea: 140806974
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Entry
140806974 CDS
T11060
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pebu Primulina eburnea
Pathway
pebu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140806974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pebu03041
]
140806974
Spliceosome [BR:
pebu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
140806974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
140806974
NCBI-ProteinID:
XP_073019661
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All DBs
Position
12:37551995..37556339
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AA seq
748 aa
AA seq
DB search
MEKENSSRRRDKDHHHHHHHHHRSKHREGSVDRDSRRGREDSVERKKRKERSKVAEENGR
KRARFEDVRVKEEVDSLEPHDAETGLIANGAIGSTSTTSSIFPGAVVAQGHPPATKVSSM
TNENKGVNISRSHEVPGKSSTDGTASDAGKSAGLSLDALTKAKRALQMQKELAERMKKIP
SLNRDAREGREGSAQMDEKEIVKVSPSANGKLPSPFPLVTPPASDPVVVSPSSSSVPVAP
PPVIPTGSGLPHLLGLTTQKYEAVKRAQELAAKMGFRQDPEFAPLINMFPGQMPPEVTIQ
PKPSRAPVLRLDALGREIDEHGNVVNISKVNSLSTLKVNINKQKKEAFQILKPELDIDPD
INPHFDSILGIDKNKLLRPKRMNFQFVEEGKWSKDAEIIKLKSQFGEAKAKELKTKQAQL
AKAKAEPGINPNLIEVGERVITREKPKELIPEVEWWDIPFLQSGAYGDVLEGDISEDKMK
LEKLMIYVEHPRPIEPPAEAPPPPPQPLKLTKKEQKKLRTQRRLGREKDRQEMIRLGVLE
PPKPKVKMSNLMKVLGSEATQDPTKLEMEIRSAAAEREQAHIDRNVARKLTPKERREKKE
RKLFDDSNSLDTIVSVYKINDLSHPQARFKVDINAQENRLTGCAIISEGLSVVVVEGGAK
PIKRYGKLILKRIDWTASVKKEDGDENDAEVKPLNKCVLVWQGSVAKPSFNRFFVQECRT
ETAARKFFSDHGVAHFWDLAVNFTEESI
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagaattcgagtcgcagacgggacaaagaccaccaccatcaccaccaccac
caccaccgttccaagcaccgagagggaagcgtcgatcgagattcgcgccgtgggagagaa
gactcggtggagaggaagaagaggaaagagagaagtaaggttgcggaagaaaatggaagg
aagagggctagatttgaggatgttagggtcaaggaggaggttgattccttggaaccgcat
gatgctgaaaccggtctgattgctaacggtgcaattggatcaacttctacgacatccagc
atttttcctggagctgttgtggctcaaggtcatcctcctgctacaaaggtatcttctatg
acaaatgaaaataagggagttaatattagcagatctcatgaggttcctgggaaatccagt
acagatgggacagcttcggatgctggaaagagtgcaggattgtctcttgatgctttaaca
aaagctaagagagctttacaaatgcagaaggagctcgctgaaaggatgaagaagatacca
tcattgaacagagatgctcgtgaagggagagagggtagtgcacagatggacgaaaaagag
attgttaaagtttctccatccgctaatggtaaattgccctcgccatttcctcttgtaact
ccccctgcctcagatcctgttgtagtctcgccaagctcatcaagtgtgcctgttgctcca
cctcctgtaattcctaccggcagtggtttgccacatcttcttgggctcactacacagaaa
tatgaagctgtgaaacgtgcacaggagctagctgccaaaatggggtttcgacaagaccca
gagtttgctcccctcataaatatgtttcctgggcagatgcccccagaggttaccattcag
ccaaagccctctagagcacctgttcttcgtttggatgcactcggtagggaaattgatgag
catggcaatgtggtgaatatttcaaaagtgaacagcttgagtaccctcaaggtaaacatc
aataagcaaaaaaaggaggccttccaaattctgaaacctgaacttgatattgatccagat
ataaatcctcattttgactcgatactggggattgacaagaataagttattgaggccaaaa
aggatgaatttccagtttgttgaggaaggaaagtggtcaaaagacgcagaaatcattaag
ctaaagtctcaatttggagaagcaaaagccaaggagctcaagacaaaacaagctcagctt
gcaaaggcgaaagcagagccaggtattaatccgaatctcatagaagtgggagagagagtt
attaccagagaaaaacccaaggagctaattcctgaagtcgagtggtgggacatacctttt
ctacaatctggtgcttatggtgatgtgcttgagggtgacatcagtgaagataaaatgaaa
ttggaaaagttaatgatatatgttgaacacccacgacctatcgagcctcctgctgaagct
cctcctcctccacctcaacctttgaagttaaccaagaaggagcagaagaaacttcgcaca
cagcgtcgattgggtcgggagaaagataggcaggaaatgattagactgggtgtactggaa
ccaccaaaacctaaagtcaaaatgagcaacctcatgaaagtgcttggttctgaagcaacc
caagatcctacaaagcttgaaatggaaatacgaagtgctgcagctgagcgtgagcaagct
cacattgacaggaatgttgctcgaaagctcactccaaaagagcgtcgtgaaaagaaagag
agaaagctttttgatgattcaaattcacttgatacaattgtctctgtttacaagataaat
gacctatctcacccccaggctcgttttaaggttgatatcaatgcccaagaaaacaggctt
acaggatgtgcaataatttcagaaggtctaagtgttgtggttgttgaaggtggtgccaaa
ccaatcaagagatatggaaagcttatacttaagagaatcgactggactgcttctgttaag
aaagaagatggggatgagaatgatgctgaggttaagccccttaacaaatgtgtacttgtg
tggcagggaagtgttgccaaaccaagctttaacagatttttcgttcaagaatgcagaact
gaaacagctgcacgcaaattcttttcggatcatggggtcgctcatttttgggatcttgca
gtcaacttcaccgaagaatcaatttaa
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