Primulina eburnea: 140807207
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Entry
140807207 CDS
T11060
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
pebu Primulina eburnea
Pathway
pebu04142
Lysosome
pebu04144
Endocytosis
pebu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140807207
04142 Lysosome
140807207
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
140807207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pebu04131
]
140807207
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pebu04147
]
140807207
Membrane trafficking [BR:
pebu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
140807207
Exosome [BR:
pebu04147
]
Exosomal proteins
Proteins found in most exosomes
140807207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
IcmW
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
140807207
NCBI-ProteinID:
XP_073020054
LinkDB
All DBs
Position
12:complement(35468670..35480107)
Genome browser
AA seq
1707 aa
AA seq
DB search
MAAANAPITMKEALTLTSIGINPQFITFTNVTMESDKYICVRETAPQNSVVIIDMSMPNQ
PLRRPITADSALMNPNTRILALKAQLPGTTQDHLQIFNIEAKAKMKSHQMPEQVVFWKWI
TPKMLGLVTQSSVYHWSIEGDSEPVKMFDRTANLANNQIINYKCDPSEKWLVLIGIAPGS
PERPQLVKGSMQLFSVDQQRSQALEAHAASFASFRVAGNDKDSILISFATKSSNSGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
DSAAAVYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
TGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIFIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKSGLYVRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSPEWAIECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVEVCIKLFEQFK
SYEGLYFFLGSYLSSSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYSNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLNTNPYYDSRVVGKYCEKRDPTLAVIAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWGKVLDPENEFRRLLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRDINRAVEFAFRVEEDAVWSQVARAQLREGLVSDAIE
SFIRADDASQFLEVIRAAEDADVYHDLVKYLLMVRQKTKEPKVDSELIYAYAKIDRLGDI
EEFILMPNVANLPNVGDRLYDEALYEAAKIIFAFISNWGKLAITLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRHEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYV
QYDEFDNAGTTVMNHSPEAWEHMQFKDIIVKVANVELYYKAVHFYLQEHPDLINDILNVL
ALRIDHTRVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKLSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWMNNMIDFAFPYLLQFIREY
TGKVDELIKEKIEAMKEVKAKEEEEKDVVMQQNLYAQLLPLALPAPPMPGMGGPGMGGGY
GVPMPPPMGGMGMPPMPPFGMPPMGSY
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctaacgccccgattaccatgaaagaagccctcacgttgactagcataggg
atcaatcctcagttcattaccttcacaaatgtgacgatggaatctgacaagtatatatgt
gttcgcgagactgctcctcaaaacagcgtggtgattattgatatgagcatgccaaatcag
ccactgaggcggcctattactgccgattctgcgctaatgaatccaaataccaggattttg
gcgttgaaagctcaacttccgggaaccactcaagatcatttgcaaatatttaacattgaa
gccaaagcaaagatgaagtcacatcagatgcccgagcaggtcgtattttggaaatggatt
acccctaagatgttgggtttggtgacacagtcctcggtatatcattggtcaattgaaggt
gattctgaacctgtaaagatgttcgatagaactgcgaacttagcgaacaaccaaataatc
aattataaatgcgatccttctgaaaagtggctggttttgatcggcattgccccgggttcg
cctgagcggcctcaactggttaaagggagtatgcagctgttttctgtcgatcagcaacgc
agtcaggcccttgaagcacatgctgcttcatttgcttctttcagagtcgcaggaaacgat
aaggattccattctaatttcttttgctacaaaatcttcaaattctggtcaaattacgtca
aagttgcatgttattgagcttggtgctcagccagggaaaccttcttttaccaaaaaacaa
gcagatctgttcttccctccagattttgctgacgactttcctgtggcaatgcagatatct
cataaatatagtcttatttatgtgattacgaagctggggctgctctttgtctatgatttg
gattctgctgctgctgtatacagaaatagaatcagtccagatcccattttcctgacgtca
gaagcttcatctgttggaggtttctatgctattaataggcgagggcaggttttactcgct
acagttaatgaagcaactatcgtgccttttgtcagtggccagctaaacaatctggagctt
gctgtcaatcttgcaaaaagaggaaaccttcctggtgccgagaatttggttgtccaacgt
ttccaagaattgtttgctcagacaaagtataaagaggccgcagagctcgctgcagaatct
cctcaagggatccttcggacgccagacactgttgctaagtttcagagtgttcctgttcaa
actgggcagacaccgccattgctgcagtatttcgggacactgttaactaaaggaaagtta
aatgcatttgaatctttggagttgtctcgccttgttgtcaaccagaacaagaagaatcta
ttggagaactggttggctgaagataaactcgagtgcagtgaggaacttggagaccttgtg
aagactgttgacaatgaccttgcgctaaaaatatttatcaaagccagagcaacaccaaaa
gttgttgcagcctttgctgagcgacgtgagtttgacaaaatcttgatctattcgaaacag
gttggctatacgccagactacctgttccttttgcaaactatactccggtcagatcctcag
ggagctgttaattttgcacttatgatgtcacaaatggagggaggttgtcctgttgattac
aataccattaccgatctctttctacagagaaacatgattcgtgaagcaacagcatttctt
ttggatgtcctgaagccaaatttgccagagcatgcattcctgcaaacaaaggtcctggag
atcaacctcgtgacctttcctaatgtagcagatgctattttggcaaatggaatgtttagt
cattacgacaggccgcggattgctcaactttgtgaaaaatctggcctttatgttcgagcg
cttcagcattactctgagctgccagatatcaaacgtgttattgtcaatactcatgcaatt
gagccccaggcgctcgtggagttctttgggacgctttctccggaatgggcaattgaatgc
atgaaagatcttttactggtcaatttgaggggaaaccttcagataattgttcaggttgca
aaagagtactgtgaacaattgggtgttgaagtatgcataaagctctttgagcagtttaag
tcctatgaaggactatatttcttcttggggtcgtatttgagctctagtgaggatcctgag
attcacttcaagtacatcgaagctgctgccaaaactggacaaattaaagaggtggagcgt
gtaactagagaatcaaatttttatgatgctgaaaagaccaagaactttttaatggaagca
aaacttccagatgcaagaccacttatcaatgtctgtgaccgctttggttttgttccagac
ctcacacattatttatactctaacaacatgctacggtacattgaaggttatgtgcaaaag
gtcaatcctggaaacgctccattggttgttggtcaactcctagatgacgaatgtcctgag
gatttcattaaaggtctgatactttctgtccgctctctgcttccagtcgagcctcttgtg
gaagagtgtgagaaaaggaatcgcctccgcctacttactcaatttttggaacatcttgtg
agtgaaggaagccaagatgtgcatgtgcacaatgctttaggtaaaatcataattgatagc
aacaacaatccagagcactttcttaacaccaacccgtactatgattcacgtgttgtgggt
aagtactgtgagaagcgtgatcctacccttgctgtcatcgcgtacagaagaggacaatgt
gatgatgaactcatcaatgttacaaataagaactctttgttcaagctgcaagctagatat
gtggttgaaagaatggatggtgatctgtggggaaaagttctagatccagaaaatgaattc
agaaggctgctcatcgatcaagttgtatcaactgctttgcctgaaagcaagagcccagag
caagtctctgctgctgttaaagcttttatgacagctgatcttcctcacgaactaattgaa
ttgctcgaaaagattgttcttcaaaattcggcatttagtgggaactttaaccttcaaaac
ttacttatcttgactgcaatcaaggcagatccatccagggttatggactacattaatagg
cttgataactttgacggcccagctgttggagaagttgctgttgaagctcaactatatgaa
gaagcttttgcgatttttaagaagtttaatttgaatgtccaggcagtcaatgttttactg
gataacattcgagacattaaccgagcagtagaatttgcattccgtgttgaagaagatgct
gtttggagtcaagtggccagagctcaactcagggaaggcctggtgagcgatgcaattgag
tcatttatacgtgccgacgatgcctcccaattcttggaagtcatccgagctgcagaggat
gcagatgtttatcatgacctggtgaagtacctcctcatggttaggcaaaaaacaaaagag
cccaaagtggacagtgaactcatttatgcatacgccaagattgataggcttggtgacatt
gaagaatttattcttatgccaaatgttgctaatctgcctaatgtcggtgatcgcttgtat
gatgaagctttgtacgaggctgcgaagatcattttcgcctttatttctaactggggtaaa
ttggcgatcacactcgtgaagttgaagcaatttcaaggtgctgttgacgcagcacggaag
gctaatagtgccaagacatggaaagaagtctgctttgcctgtgttgatgctgaggagttt
cgcttggctcagatatgtggtcttaacattattgtacaggttgatgatctggaagaggtt
agtgagtattatcaaaacagaggatgctttaatgagcttatatctcttatggagagcggt
ttaggattggaacgagcccatatggggatcttcaccgagttgggtgtcctctatgctaga
taccgccatgagaagcttatggagcacatcaaattgttctctactcgtctcaatattccc
aagctgatccgagcgtgcgatgaacagcagcattggcaagaactgacttacctatacgtc
cagtatgacgagtttgataatgcggggacaactgtcatgaatcattctccggaggcttgg
gaacacatgcagttcaaagatattattgtcaaagttgccaatgtcgagctatattacaaa
gctgtgcacttctatttgcaagagcaccccgacctcatcaatgatattttgaatgtccta
gctcttcgcattgatcacactcgtgtcgtagacataatgagaaaagctggtcatctgcgt
cttgttaagccttatatggtagcagttcagagcaataacgtgtctgcagtgaatgaagct
ctcaatgagatttatgtcgaggaagaggattatgatagactacgtgaatcaattgattta
catgataatttcgatcagattggccttgctcaaaagattgagaagcacgagcttcttgag
atgaggcgtgttgctgcttacatctacaagaaagccggcaggtggaagttatcaattgca
ttgtccaagaaagacaacctttacaaagatgcaatggagacagcgtcacaatcgggtgat
cgggaacttgctgaagagttgcttgtttacttcattgaacagggtaagaaggagtgcttt
gcatcatgcctcttcgtttgttatgatctgattcgcccagatgttgcacttgagcttgct
tggatgaataacatgatcgattttgcctttccctatctgttacagtttatccgtgaatac
actggcaaagttgatgaactaattaaggaaaagattgaggccatgaaggaagtgaaagca
aaagaggaggaggagaaagatgttgttatgcaacagaatttgtatgctcagttgctgcct
cttgctttacccgctccacctatgcccggcatgggaggtcctggaatggggggtggttat
ggtgttcccatgccaccaccaatgggtggtatgggcatgcctccgatgccaccttttggc
atgccaccgatggggtcttattga
DBGET
integrated database retrieval system