Primulina eburnea: 140807319
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Entry
140807319 CDS
T11060
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
pebu Primulina eburnea
Pathway
pebu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
140807319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pebu04121
]
140807319
03036 Chromosome and associated proteins [BR:
pebu03036
]
140807319
Ubiquitin system [BR:
pebu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
140807319
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
140807319
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_WDR3_2nd
MIOS_WD40
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
140807319
NCBI-ProteinID:
XP_073020222
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Position
12:5057041..5058405
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AA seq
332 aa
AA seq
DB search
MGSSTQESHLRSETCVTYDSPFPIYAMAFSAADRRHIAVGSFVEEFDNRVDILCFDDECY
SIKPIPALSVPHPYPATKLMFHPSPSTGNLLASSGDYLRLWEIRDGSIEPMSTLDNSKTS
DYCAPLTSFDWNEVEPHRIGTSSIDTTCTIWDVEKGVVETQLISHDKEVYDIAWREAGVF
GSVSGDGSVRLFDLRHKERSTILYESPKPETPLSRLAWNKQDLRYMATFLMNSNKILILD
TRYPTVAAAELERHQACVNAIAWAPLSCRHICSGGDDGQAFLWELPILSGTNGIDPMYMY
SAGSEINQLHWSAAQPDWIAVALENKMQMLKV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgggtagttccacccaagaatcccacctcagatccgaaacctgcgtcacatatgactca
ccctttcccatatacgccatggcgttttctgccgccgaccgccgccatatcgccgtcggg
agtttcgtagaagaattcgacaaccgcgtcgacattctctgcttcgacgatgaatgctat
tccatcaaacctatacctgcactatcggtccctcacccctaccccgcaactaaactcatg
tttcacccctcaccatctactggcaacctccttgcttcctccggcgactacctacgcctc
tgggaaatacgtgatggttcaatcgaacccatgtctacgctcgacaacagcaaaactagc
gactactgtgcccctctaacttcattcgattggaatgaggtggagccccatcgaatcgga
acatcaagcatcgacactacctgcaccatatgggatgtggaaaagggcgttgtggaaacc
caactgatttcccacgataaagaagtgtacgatattgcctggcgcgaggcaggagttttt
ggatcagtttcaggagacgggtcggtcagacttttcgatctcaggcataaggagcgctcc
acaattctttacgaaagcccgaagccggaaacgccgctatcgaggttggcttggaataag
caagatttgaggtacatggcgacgttcttgatgaatagcaataagattttgatactggat
accaggtatcctacagtggctgccgctgaattagaaaggcaccaggcgtgtgtaaatgca
attgcttgggccccgctgagttgcaggcacatatgttctggtggggatgatgggcaggct
tttctttgggagttgccgattctttctgggacgaacgggattgatcccatgtatatgtac
tcggcaggctcggagatcaatcagcttcactggtcggcggcgcagcctgactggattgct
gttgccctggaaaataagatgcagatgctcaaagtttga
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