KEGG   Primulina eburnea: 140808748
Entry
140808748         CDS       T11060                                 
Name
(RefSeq) uncharacterized protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
pebu  Primulina eburnea
Pathway
pebu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pebu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140808748
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pebu03019]
    140808748
   03041 Spliceosome [BR:pebu03041]
    140808748
Messenger RNA biogenesis [BR:pebu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     140808748
Spliceosome [BR:pebu03041]
 Complex B
  Other components
   Prp19-related factors
    140808748
 Complex C
    140808748
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_15 PPR PKI
Other DBs
NCBI-GeneID: 140808748
NCBI-ProteinID: XP_073022073
LinkDB
Position
13:complement(23569721..23587024)
AA seq 912 aa
MVISQELYPSEEDYLYEEEVLRNPNNVKLWWRYLIARGEAPFRKRAIIYERALKALPGSY
KLWHAYLRERLELVRNLPINHAQYQTLNNTFERALATMHKMPRIWMMYLQSLTRQKLITK
TRHTFDRALCALPVTQHDRIWEYYLVFVSQKGVPVETSLRVYRRYLKYDPSHIEDFIEFL
VNSELWQEASERLAGVLNDDRFYSLKGKTKHRLWLELCDLLTQHASEVSGLNVDAIIRGG
IKKFTDEVGRLWTSLSDYYIRRGLLEKARDIFEEGMTTVITVRDFSVIFDAYSQFEESML
SIKMENMDLSDDEDDKENENEEKEDEEEDDRLDFEKLKKRIDTFWLKDDKDVDLRLARLE
YLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKAVGKPH
TLWVAFAKLYESHRDVTNARVIFDKAVQVNFKAVDHLASVWCEWAEMELRHKNFKGALDL
MRRATAEPSVEVKRRVAADGNKPVQIILHRSLKLWTFYVDLEESLGSLESTRAVYERILD
LRIATPQIIINYSMLLEDNKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKSK
LERARELFEHAVEMAPAEAVKPLYLQYAKLEEDFGLAKRAMRVYSQATKAVPANEKMGMY
EIYIARAAEIFGIPKTREIYEQAIESGLPDKDVKVMCLKYAELEKSLGEIDRSRALYKHA
SQFADPRSDPDFWNKWHEFEVQLGNEDTFREMLRVKRSVSASYSQTHFILPEYLMQKDQM
QTLDEAKDVLKKAGVDDDEMAALERQLVPTLNDTKVKDSGRRLGFVSAGMQNEGESLSNR
EDIELPEESDSEDDKVEIAQKDVPTAVFGGLVRKREESEEDVEAPDSTITESKENDAHLG
ALERIKRMRRGA
NT seq 2739 nt   +upstreamnt  +downstreamnt
atggtgatatcacaggagttgtatccaagtgaagaggactacctgtatgaagaagaagtg
ctccgcaaccctaataacgtcaagctgtggtggcggtatttaattgcccgcggagaagca
cctttccgaaagcgtgccattatttatgagcgtgctctcaaggcattgccaggaagctac
aagctttggcacgcgtacctccgggaacgccttgagctggttaggaatctgcctatcaat
cacgcacagtatcaaaccttgaacaacacgttcgagcgagctctggctacaatgcataag
atgccccgcatttggatgatgtatttgcagtcattaactcggcagaagttgattaccaag
acacggcacacctttgatagagctttgtgcgctctcccagttacgcaacatgataggatt
tgggaatattatttagtctttgtttcgcagaagggtgtccctgttgaaacttctctgaga
gtgtacaggaggtacttgaagtatgatccaagtcatattgaggattttattgagtttttg
gttaattcagagttgtggcaggaagcctcagagaggttggcaggggttttaaatgatgat
cggttttactctttaaaggggaagacaaagcacaggttgtggctggaattgtgcgatctg
ttgacacaacatgctagtgaagtatcagggttgaatgtggatgcaataattaggggtgga
attaagaagtttacagatgaggttggaagactttggacatcattgtcggattattatatt
aggaggggtttactggagaaggccagggatatttttgaggaagggatgactacagtgatt
acagtgagagactttagcgttatatttgatgcatattctcagtttgaagagagtatgttg
tccattaagatggaaaatatggatcttagtgatgatgaggatgacaaggagaatgaaaat
gaagagaaggaagatgaagaggaggatgacaggttggattttgagaagttgaagaagaga
attgacacattttggttgaaagatgataaggatgtggatttgaggttggcaaggttggag
tatctgatggataggagaccagagttagctaacagtgtgctcttgagacagaatcctcat
aatgtagagcagtggcaccggagagttaagctctttgaagggaaccccacgaagcaaatt
cttacttacacggaggcagttaggacagtagatccaatgaaggctgttgggaagccacat
actttgtgggttgcatttgctaagttatatgagagccaccgagatgttactaatgcccgg
gttatttttgacaaggcagtgcaggtcaattttaaggctgtggaccatctggccagtgtt
tggtgtgaatgggcggagatggagcttaggcacaaaaattttaagggcgcactagatttg
atgcgtcgagctaccgcagagccatcagttgaggtcaagagaagagtggctgctgatggc
aacaagccggtgcaaattatacttcacaggtctcttaaactttggacattctatgtggat
ttagaggaaagcttgggcagcctggagtccactcgtgcagtttacgaaagaatattggat
ttgagaatagccacaccccaaattattataaactattcaatgctcttagaagataacaag
tactttgaagatgcttttaaggtttatgagagaggtgtgaagatattcaaatacccccat
gtgaaagatatctgggtcacttacctttcaaagttcgtcaagagatatgggaaatcaaaa
ctagaacgagctcgagagttatttgagcatgctgttgaaatggcacctgcagaagcagtg
aaacctctgtatcttcaatatgcaaagctagaagaagattttggtctggctaaaagagca
atgagagtatacagtcaggcaacaaaagctgtccctgctaatgagaaaatgggcatgtat
gaaatatacattgcccgtgctgctgaaatatttggcataccaaaaacgagagagatttat
gagcaagcaatagaatctggcctcccagacaaagatgtcaaggttatgtgtttgaagtat
gcagagcttgagaaaagccttggagaaattgaccgcagtcgtgcattatataaacacgct
tcacagtttgccgaccctaggtctgaccccgacttctggaataaatggcacgaatttgaa
gtgcagcttgggaatgaagatactttccgagagatgctccgagttaaaagaagtgtttct
gcaagctatagccagacacactttatccttccagagtatttgatgcaaaaggatcagatg
cagacccttgatgaggcaaaggatgtacttaagaaagctggtgtcgatgatgatgaaatg
gctgcccttgaaaggcagttagtccctactctcaatgataccaaagtgaaagatagtggt
agacgattaggatttgtcagcgctgggatgcaaaatgaaggtgagtccctatcaaatagg
gaggatatagagcttccagaagaaagtgattctgaagatgataaggttgagatagcccaa
aaagatgttccaacagccgtatttggaggtctggtgcggaaaagggaagaatctgaggaa
gacgtggaagctcctgattcaactattactgaaagcaaagaaaatgatgcccatcttggt
gctttggagagaataaaaaggatgaggcgaggcgcatag

DBGET integrated database retrieval system