Primulina eburnea: 140808748
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Entry
140808748 CDS
T11060
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pebu Primulina eburnea
Pathway
pebu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140808748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140808748
03041 Spliceosome [BR:
pebu03041
]
140808748
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
140808748
Spliceosome [BR:
pebu03041
]
Complex B
Other components
Prp19-related factors
140808748
Complex C
140808748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
TPR_15
PPR
PKI
Motif
Other DBs
NCBI-GeneID:
140808748
NCBI-ProteinID:
XP_073022073
LinkDB
All DBs
Position
13:complement(23569721..23587024)
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AA seq
912 aa
AA seq
DB search
MVISQELYPSEEDYLYEEEVLRNPNNVKLWWRYLIARGEAPFRKRAIIYERALKALPGSY
KLWHAYLRERLELVRNLPINHAQYQTLNNTFERALATMHKMPRIWMMYLQSLTRQKLITK
TRHTFDRALCALPVTQHDRIWEYYLVFVSQKGVPVETSLRVYRRYLKYDPSHIEDFIEFL
VNSELWQEASERLAGVLNDDRFYSLKGKTKHRLWLELCDLLTQHASEVSGLNVDAIIRGG
IKKFTDEVGRLWTSLSDYYIRRGLLEKARDIFEEGMTTVITVRDFSVIFDAYSQFEESML
SIKMENMDLSDDEDDKENENEEKEDEEEDDRLDFEKLKKRIDTFWLKDDKDVDLRLARLE
YLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKAVGKPH
TLWVAFAKLYESHRDVTNARVIFDKAVQVNFKAVDHLASVWCEWAEMELRHKNFKGALDL
MRRATAEPSVEVKRRVAADGNKPVQIILHRSLKLWTFYVDLEESLGSLESTRAVYERILD
LRIATPQIIINYSMLLEDNKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKSK
LERARELFEHAVEMAPAEAVKPLYLQYAKLEEDFGLAKRAMRVYSQATKAVPANEKMGMY
EIYIARAAEIFGIPKTREIYEQAIESGLPDKDVKVMCLKYAELEKSLGEIDRSRALYKHA
SQFADPRSDPDFWNKWHEFEVQLGNEDTFREMLRVKRSVSASYSQTHFILPEYLMQKDQM
QTLDEAKDVLKKAGVDDDEMAALERQLVPTLNDTKVKDSGRRLGFVSAGMQNEGESLSNR
EDIELPEESDSEDDKVEIAQKDVPTAVFGGLVRKREESEEDVEAPDSTITESKENDAHLG
ALERIKRMRRGA
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggtgatatcacaggagttgtatccaagtgaagaggactacctgtatgaagaagaagtg
ctccgcaaccctaataacgtcaagctgtggtggcggtatttaattgcccgcggagaagca
cctttccgaaagcgtgccattatttatgagcgtgctctcaaggcattgccaggaagctac
aagctttggcacgcgtacctccgggaacgccttgagctggttaggaatctgcctatcaat
cacgcacagtatcaaaccttgaacaacacgttcgagcgagctctggctacaatgcataag
atgccccgcatttggatgatgtatttgcagtcattaactcggcagaagttgattaccaag
acacggcacacctttgatagagctttgtgcgctctcccagttacgcaacatgataggatt
tgggaatattatttagtctttgtttcgcagaagggtgtccctgttgaaacttctctgaga
gtgtacaggaggtacttgaagtatgatccaagtcatattgaggattttattgagtttttg
gttaattcagagttgtggcaggaagcctcagagaggttggcaggggttttaaatgatgat
cggttttactctttaaaggggaagacaaagcacaggttgtggctggaattgtgcgatctg
ttgacacaacatgctagtgaagtatcagggttgaatgtggatgcaataattaggggtgga
attaagaagtttacagatgaggttggaagactttggacatcattgtcggattattatatt
aggaggggtttactggagaaggccagggatatttttgaggaagggatgactacagtgatt
acagtgagagactttagcgttatatttgatgcatattctcagtttgaagagagtatgttg
tccattaagatggaaaatatggatcttagtgatgatgaggatgacaaggagaatgaaaat
gaagagaaggaagatgaagaggaggatgacaggttggattttgagaagttgaagaagaga
attgacacattttggttgaaagatgataaggatgtggatttgaggttggcaaggttggag
tatctgatggataggagaccagagttagctaacagtgtgctcttgagacagaatcctcat
aatgtagagcagtggcaccggagagttaagctctttgaagggaaccccacgaagcaaatt
cttacttacacggaggcagttaggacagtagatccaatgaaggctgttgggaagccacat
actttgtgggttgcatttgctaagttatatgagagccaccgagatgttactaatgcccgg
gttatttttgacaaggcagtgcaggtcaattttaaggctgtggaccatctggccagtgtt
tggtgtgaatgggcggagatggagcttaggcacaaaaattttaagggcgcactagatttg
atgcgtcgagctaccgcagagccatcagttgaggtcaagagaagagtggctgctgatggc
aacaagccggtgcaaattatacttcacaggtctcttaaactttggacattctatgtggat
ttagaggaaagcttgggcagcctggagtccactcgtgcagtttacgaaagaatattggat
ttgagaatagccacaccccaaattattataaactattcaatgctcttagaagataacaag
tactttgaagatgcttttaaggtttatgagagaggtgtgaagatattcaaatacccccat
gtgaaagatatctgggtcacttacctttcaaagttcgtcaagagatatgggaaatcaaaa
ctagaacgagctcgagagttatttgagcatgctgttgaaatggcacctgcagaagcagtg
aaacctctgtatcttcaatatgcaaagctagaagaagattttggtctggctaaaagagca
atgagagtatacagtcaggcaacaaaagctgtccctgctaatgagaaaatgggcatgtat
gaaatatacattgcccgtgctgctgaaatatttggcataccaaaaacgagagagatttat
gagcaagcaatagaatctggcctcccagacaaagatgtcaaggttatgtgtttgaagtat
gcagagcttgagaaaagccttggagaaattgaccgcagtcgtgcattatataaacacgct
tcacagtttgccgaccctaggtctgaccccgacttctggaataaatggcacgaatttgaa
gtgcagcttgggaatgaagatactttccgagagatgctccgagttaaaagaagtgtttct
gcaagctatagccagacacactttatccttccagagtatttgatgcaaaaggatcagatg
cagacccttgatgaggcaaaggatgtacttaagaaagctggtgtcgatgatgatgaaatg
gctgcccttgaaaggcagttagtccctactctcaatgataccaaagtgaaagatagtggt
agacgattaggatttgtcagcgctgggatgcaaaatgaaggtgagtccctatcaaatagg
gaggatatagagcttccagaagaaagtgattctgaagatgataaggttgagatagcccaa
aaagatgttccaacagccgtatttggaggtctggtgcggaaaagggaagaatctgaggaa
gacgtggaagctcctgattcaactattactgaaagcaaagaaaatgatgcccatcttggt
gctttggagagaataaaaaggatgaggcgaggcgcatag
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