KEGG   Primulina eburnea: 140808773
Entry
140808773         CDS       T11060                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like isoform X1
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
pebu  Primulina eburnea
Brite
KEGG Orthology (KO) [BR:pebu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pebu03009]
    140808773
Ribosome biogenesis [BR:pebu03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    140808773
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F WDR54 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_IFT122_1st Ge1_WD40 Beta-prop_WDR75_1st Beta-prop_LRRK2 Beta-prop_SPT8 Beta-prop_DCAF12 DUF4363 DUF5984
Other DBs
NCBI-GeneID: 140808773
NCBI-ProteinID: XP_073022120
LinkDB
Position
13:21184758..21191612
AA seq 569 aa
MEGQISQQVTYFNTPNLLEHHPPYIPPFQVQGLAPGPGQEEIGLDLQWNFEMEPQKKRPK
EQVFLENSNDYNKNNSNSQIVCSVIAPQHKQRFRKGDRLRQEILQKFQATQWLVSLNPAM
EAAEILIASSPADADISCWNLCSGEELRRFHSCSSPPHGLVNVAGRFLASSQLRKSKHSS
SGSILYWSWNKPHVEARSILAEPIAPLVSNSEGTYIAGGGLSGDIYIWEIATGKLLKKWH
AHYRAVTCLVFNDDQSLLISGAEDGCVRVWSLFLIFDDVRREEARSLYEYSFHEHSLKVT
DIKTGHGGCNAIIVSASEDRTCKVWSLYEGKLLTDIVFPSIIDTIVLGPRETVFYAGGRD
GKIYIAGLNSPGTPNNSLVSLTEHSKAVTCLAFSADGLLLVSGSEDGLIRVWDTRTQNIV
RVFRHTKGVVNNVLITRQSQSVFSQMSKKSGDTTPKGHSFLFPPPLQKYASTPEENAHVD
VYLSPHDNSDKFLDLSYISVQTMENQIKELERQGSSVASEVELERLKSDQERSAQMIQHW
ERMYKKLHQFCVEEILDRSLTEGARSREL
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggagggtcagatttcgcagcaagtgacctactttaacacccctaatctccttgaacac
caccccccttacatccctccctttcaagttcaaggtttggctcctggcccgggtcaagaa
gaaatcgggctcgatttacagtggaatttcgagatggagccccagaaaaagaggcccaaa
gaacaagtgttcctggagaacagtaatgattataataagaacaatagtaactcccagatc
gtctgctcagtcattgctcctcaacacaaacagagattccgtaaaggtgatcgtctgagg
caagagattttacagaagtttcaagcaacccagtggctagttagcctaaaccctgcgatg
gaagccgctgaaatcttgatagcgtcatcaccggcagacgccgacataagctgttggaac
ctctgcagcggcgaggagctccgacggttccattcatgctcttctcctcctcacggtctc
gtcaacgtagccggccgctttcttgcctcgtcccaactacgaaaatctaagcactcttct
tctggctccatcctttattggtcctggaacaagccacatgtagaagcccgtagcatcctt
gcagaacccattgcgccacttgtctcaaatagtgagggaacttatattgctggaggaggt
ctttcaggcgatatctacatttgggagattgcgactgggaaattgctgaagaagtggcat
gcacattacagggctgtcacttgcctggtattcaatgatgaccaatccctcttgatttca
ggggcagaggatggatgtgttcgggtgtggtcacttttcttgatatttgatgatgtgagg
agagaagaggcaagatctctgtatgagtacagctttcacgagcattctttgaaagtgacc
gacattaagactggacatggaggatgtaatgccatcatcgtgtcggcttctgaggaccgt
acatgcaaggtatggagcttatatgaaggaaaactattaacagatatagtctttccttcc
ataattgatactattgtcttgggacctagagaaacagtattttatgctggtggcagggat
ggcaaaatttatattgccggattaaattctcctggtacccccaacaacagccttgtttca
ttgactgagcatagtaaagctgtaacatgcttggcttttagtgctgatggacttctatta
gtttctggatcagaggatggtttgattcgagtttgggatactagaactcaaaatatcgtt
cgtgttttcagacacacaaaaggtgtagttaataacgttctcatcaccagacagtcgcag
tctgtattttctcagatgtctaaaaagtcaggagatacaacaccaaaagggcacagcttc
ctttttccacccccactacaaaagtatgctagtacgccagaggaaaatgcccatgttgac
gtttatctcagtcctcatgacaattctgacaaattcttagacttgtcgtatattagcgtt
caaacaatggagaatcaaatcaaagaactagagcgacaaggttcttcagtggcatctgag
gtggaattagaaaggctgaaaagcgatcaagaacgatctgctcaaatgattcagcactgg
gagagaatgtacaagaagctacatcagttttgcgttgaagagattttggatcgtagtctc
actgaaggtgccagaagtcgtgagctatga

DBGET integrated database retrieval system