Primulina eburnea: 140808944
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Entry
140808944 CDS
T11060
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pebu Primulina eburnea
Pathway
pebu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140808944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140808944
03110 Chaperones and folding catalysts [BR:
pebu03110
]
140808944
03029 Mitochondrial biogenesis [BR:
pebu03029
]
140808944
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pebu04147
]
140808944
Enzymes [BR:
pebu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
140808944
Messenger RNA biogenesis [BR:
pebu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
140808944
Chaperones and folding catalysts [BR:
pebu03110
]
Heat shock proteins
HSP60 / Chaperonin
140808944
Mitochondrial biogenesis [BR:
pebu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
140808944
Exosome [BR:
pebu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140808944
Exosomal proteins of other body fluids (saliva and urine)
140808944
Exosomal proteins of breast cancer cells
140808944
Exosomal proteins of colorectal cancer cells
140808944
Exosomal proteins of bladder cancer cells
140808944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
140808944
NCBI-ProteinID:
XP_073022439
LinkDB
All DBs
Position
13:complement(28374517..28378265)
Genome browser
AA seq
595 aa
AA seq
DB search
MASANAISTAALLPSPSKRGGLKGRKVSQLQQGQKFENKQVKNRFVVRANAKEIAFDQKS
RAAMQSGIDKLADAVGLTLGPRGRNVVLDEYGAPKVVNDGVTIARAIELPDAMENAGAAL
IREVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSLKKGIDKTVQGLVDELEK
KSRPIKGRDDIKAIATISAGNDDTIGIMIADAVDKVGPDGVLSIESSSSFETTVDVEEGM
EIDRGYISPQFVTNQEKLLVEFENARILVTDQKISAIKDIIPLLEKTTQLRAPLLIIAED
VTGEALATLVVNKLRGVLNVAAIKAPGFGERRKALLQDIAILTGAEYQATDLALLVENTD
VDQLGIARKITISKDSTTIIADAASKDELQARIAQLKKELSETESVYDSEKLAERIAKLS
GGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVVPTIKEKI
EDADERLGADIIQKALVAPALLIAQNAGVEGEVVVEKLKSSDWEFGYNAMTDTYENLVEA
GVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKMPLAAAAGGPPGMGSYSV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagctaatgccatatctaccgccgcgctcctcccttctccgtctaaacggggt
ggattgaagggccggaaagtgagccaattacagcaggggcagaagtttgagaacaagcag
gtcaagaatcggtttgttgtcagggccaatgctaaggaaattgcgttcgatcagaagtca
agggctgctatgcaatctggtattgataagcttgctgatgcggttggccttactctcgga
cccaggggaagaaatgttgtacttgatgaatacggggcaccaaaggtggtcaacgacggt
gtcaccattgctcgagccatagaattgcctgatgctatggaaaatgctggtgctgctttg
attagggaggttgctagcaagaccaatgattctgctggtgatgggacaactacagcatcc
atccttgctcgtgaaattatcaaactcggccttctaagtgttacctccggggcaaatccg
gtttcattgaagaaaggtattgataaaactgtgcagggtttggttgatgagcttgagaaa
aaatccaggcccattaaaggtcgtgatgatatcaaagcaattgccactatctctgccgga
aatgatgataccattgggataatgattgccgatgctgttgacaaggttggaccagatggt
gtcttatccattgagtcatcatcttcctttgagaccacagttgatgtagaagaaggaatg
gagattgatcgaggatacatctccccgcaatttgtcaccaaccaagagaagctgcttgtt
gaatttgagaatgcgagaatattagtcacggaccaaaagatttctgccattaaggatatt
attcccttgcttgagaagactactcagttacgagctcctttgctcatcattgctgaagat
gtcaccggagaagctttggcaactcttgttgtaaacaagcttaggggtgttctgaatgtt
gctgccatcaaagctccgggttttggagaaagaaggaaagcacttcttcaagatattgcc
atcttgacaggggctgaatatcaagctactgatttggccttgcttgtggaaaacactgat
gtggatcagttgggtatagcaagaaagataaccattagcaaagactcaaccaccatcatt
gctgatgctgcatctaaagatgagctccaggctaggattgctcagcttaaaaaggaactc
tctgagacggagtcagtttatgattctgagaaacttgctgaaagaattgcaaaattatct
ggtggggttgccgtgatcaaggttggtgcagcaacagagaccgagctcgaggaccgcaag
cttcgtattgaggatgccaaaaatgcaacatttgctgctattgaggaaggcattgtgccg
ggtggcggtgctgcattagtgcacctatcaactgttgttccaaccatcaaggagaagatt
gaagatgccgatgaaagattaggcgccgatataattcaaaaggccctagttgcaccagca
ttgttgattgctcaaaatgctggagtcgaaggtgaggtggtcgtggagaaattgaagtct
agcgattgggagtttggttacaatgcaatgaccgacacatacgagaacttggtagaagct
ggagttattgaccctgctaaggtaacaagatgtgcactgcaaaatgctgcttcggttgct
ggaatggtgcttaccacgcaagccatagttgtggagaaacctaagccaaagatgccacta
gcagctgctgctggtggcccgccaggtatgggcagctactcagtgtga
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