Primulina eburnea: 140808998
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Entry
140808998 CDS
T11060
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pebu03400
]
140808998
Enzymes [BR:
pebu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
140808998
DNA repair and recombination proteins [BR:
pebu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
140808998
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
AAA_19
DEXQc_Suv3
T2SSE
Peptidase_M13_N
Helicase_PWI
TANGO2
Motif
Other DBs
NCBI-GeneID:
140808998
NCBI-ProteinID:
XP_073022529
LinkDB
All DBs
Position
13:complement(30509702..30550471)
Genome browser
AA seq
2084 aa
AA seq
DB search
MLVDLPRLTNSLRLPFDVDQAYLNRKSVLRSLKNSSSAALHGEWELARKIVYRWDEASAE
VRQAYKQYIAAVVELMGGEVVSEEFHEVALYIYHLFKVTSDNKDGGSCESFSDKKFELEN
FFGHAVPDANLQKVASLVDRLSGSQKNEQKTMNIPESTSVGDKELEFGADLAFQPPARFL
VDFALERGEITVDETCTSFSQPEGWSDYGGSESLRPVNEGNFDLEWLRDACDKIVSESTS
HFPQDELAMTICQVLDSEKPGDEIAGDLLDLVGDGSFEIVQDLIMHRKELVDSIHRGLIV
LKSDKSTSSMQPRMPSYATQVTVQTESERQIDKLRRKEDKKNRRGTDHGMENDFSSLTFS
SLLQASEKKNLFDDLVGYSDGPQLAATALPQGTTRKHYKGYEEVTIPATPTAPMKPGEKL
IEIKELDDFAQAAFHGYKSLNRIQSRIYQKAFFSNENILVCAPTGAGKTNIAMISILHEI
GQHLRDGYLHKDEFKIVYVAPMKALAAEVTSAFSHRLSPLNITVRELTGDMQLSKNELEE
TQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVEST
QSMIRIVGLSATLPNYLEVAQFLRVNSDTGLFFFDSSYRPVPLEQQYIGISEPNFVARKE
LMNEICYKKVVDSIRRGHQVMVFVHSRKDTGKTAENLVEMAKRYEDFELFSNTSHPQSGL
MKKEVLKSRNKELVQLFDYAIGIHHAGMLRVDRGLTERLFSGGLLKVLVCTATLAWGVNL
PAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLR
LLTSQLPIESQFINSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMKMNPLAYGIGWD
EVLADPSLSLKQRSLVSDSARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETY
NEMLKRHMSDSEVIDMIAHSSEFENIVVREEEQNELELMTRKCPLEVKGGPSNKHGKVSI
LIQLYISRGSIDTFSLVSDAAYISSSLARVMRALFEICLCRGWSEMSSFMLEYCKAVDRQ
IWPHQHPLRQFDKDISVEILRKLEEREVDLDRLYEMQEKDIGALIRYAPGGKLVKQYLGY
FPMVQLFATVSPITRTVLKVDLIITPEFVWKDRFHGTVQRWWILVEDSENDHIYHSELFS
LTKRMAKGEPQKLSFTVPIFEPHPPQYIIRAISDSWLHAEAFYIISIQNLALPEAHTTHT
ELLDLKPLPVTALSCRTYEALYDFSHFNPIQTQAFHVLYHTDQNVLLGAPTGSGKTISAE
LAMLHLFNTQPDMKVIYIAPLKALVRERMNDWRKRLVSKLGKHMVEMTGDYTPDLTALLS
TDIIISTPEKWDGISRNWHSRGYVKKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQT
DRPVRFVGLSTALANAHDLADWLGVEENGLFNFKPSVRPVPLEVHIQGYPGKYYCPRMNS
MNKPTYAAICTHSPIKPVLIFVSSRRQTRLTALDLIQFAASDERPRQFLAIPEEALQMIL
SQVADQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLV
VIKGTEYFDAKVKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEP
FPVESSLREQLHDHINAEIVSGTICHKEDAVHYLTWTYLFRRLGVNPAYYGLEDTDSGTL
SSYLSRLMLNTFEDLEDSGCIKIDEDKVEPLMLGSIASQYYLKYTTVSMFASNIGADTSL
EVFLHILAGASEYDELPVRHNEENHNADLSNKVRFMVDQNLLDDPHVKANLLFQAHFSRV
ELPVTDYVTDLKSVLDQCIRIIQAMIDLCANSGWFSSTMTCMRLLQMVMQGLWFDTDSPL
WMLPCMTDDLITTLSQRGILNVLQLLYLPKANFQNLTGSAIASKLHEELQQFPRIQARIK
VQRRRSDDSCDSLNIRLEKTHPQKNSARAFTPRFPKVKDEAWWLVLGNTSTSELYALKRV
SFTNVLQTRMDVPFRVNDFQGMKLVVVSDCYIGFEHEYSVETLL
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
atgttggtcgatctcccgcgcttaaccaattcacttcgactgccttttgatgttgatcaa
gcttatctcaatcgaaaatccgttctgagaagcctcaagaactctagttccgcggctttg
catggagagtgggagcttgctcgtaagattgtgtatcgatgggacgaagcatctgctgaa
gtacgacaagcatacaaacaatatattgctgcagtcgttgagttgatgggcggtgaggtg
gtgtcagaggaatttcatgaagtggcattgtatatttatcatctatttaaagtcacctct
gacaacaaagatggtgggagctgcgagagtttttctgataaaaagtttgaattggaaaat
ttttttggccacgctgttccggatgcaaatttacaaaaagttgcatccctggtagataga
ctttctggttcacagaagaatgagcagaagaccatgaatattccagaatcgacgagtgta
ggtgacaaggagttggaatttggtgcagaccttgctttccaacctcctgcccggtttcta
gttgattttgccttggagcgtggagaaatcacagtggatgaaacttgcacgtctttttct
caacctgagggatggtctgattatggtggttcagaaagcctccgtcccgttaatgaaggt
aactttgatctagaatggttgcgggatgcatgtgacaaaattgttagtgaaagcacttca
catttccctcaagatgaactggcaatgaccatttgccaggttcttgactcagagaaacca
ggtgatgagatagctggtgatttactggatcttgttggtgatggctcatttgaaattgtt
caagaccttatcatgcatagaaaagaacttgttgatagtattcatcgtggacttattgta
ctcaaatccgacaaatcaacctcaagcatgcaaccacggatgcctagttacgctactcag
gtaactgtgcaaacagagtccgaacgacaaattgataaacttcgtcgcaaggaggacaaa
aagaataggcgcgggactgatcatgggatggagaatgatttttcttctctgacatttagt
tccctacttcaagcaagtgagaagaaaaatctttttgatgatcttgtgggatacagtgat
gggcctcagcttgctgcgactgcccttcctcagggcacgacgagaaagcattataaggga
tatgaagaagtcactattcctgccacgcctactgcaccgatgaaacctggggagaagctg
attgaaataaaagagttagatgattttgcacaagctgctttccatgggtacaaatctttg
aatcgcatccagagcagaatataccaaaaagctttcttcagtaatgaaaatatactggtc
tgtgctccaactggagctgggaaaaccaatatagccatgatatctattttgcatgagata
gggcagcacttaagagatggctatttgcacaaggatgaatttaagatcgtttatgttgct
cccatgaaggcattagctgcagaggttacatcagcgttcagccatcgcttgtctccacta
aatataaccgtgagagaacttactggtgacatgcaactttctaaaaatgaacttgaagaa
actcagatgattgtgacaacacctgaaaaatgggatgttatcactcgtaaaagtagtgat
atgtctctatctatgctggtaaagctcctaatcattgatgaagtacaccttttgaatgat
gataggggtcctgtaatagaggcgttagtagctcgcactcttcgtcaggtagagtcgaca
caaagtatgattcgtatagtgggactctctgccactctaccgaattatttggaggttgct
cagtttttaagggtaaattcagatactggtctattcttctttgattcaagctaccgccca
gttcctctggagcagcaatatattggtatttctgaaccgaattttgtagctcgtaaggaa
ttgatgaatgagatatgctacaagaaggttgttgattcaataaggcgaggacatcaggtt
atggtttttgttcattcacggaaagatactggaaaaaccgctgaaaacctggttgaaatg
gccaagagatacgaggatttcgagcttttttcaaacacctctcatccacaatcaggactt
atgaagaaagaagttctgaagtccaggaataaggagctggtccaactctttgactatgct
attggcatccatcatgctgggatgttgcgtgttgacagaggactgactgagcggctcttc
tctggtggacttttaaaggtccttgtttgcacagcaactttggcatggggagtaaatctg
ccagctcatacagttgtgattaagggaacacaaatatatgacccaaaggctggtgggtgg
agagatctgggcatgcttgatgttatgcagatatttgggcgtgctgggaggccgcagttc
gataaaagtggtgaaggaattataatcacaagccatgacaaactagcttattatttgcga
cttttgaccagtcaacttcccatcgagagtcagtttattaattccttaaaagataattta
aatgcggaggtggcactaggcactgtaacaaatgttaaagaagcctgtgcttggcttggg
tatacatatcttttcataaggatgaaaatgaatcctttggcatatggcattggatgggat
gaggtacttgctgatccttcgctgagtctaaagcaaagatctctggtctctgattctgca
cgtgctcttgataaggcaaaaatgatgcgcttcgatgagaagagtggaaatttttattgt
actgagcttggtcgtatagcaagccacttttatatccaatactccagtgttgaaacttat
aatgaaatgttgaaacgccacatgagtgatagcgaggtgatcgacatgattgcccattct
tctgaatttgaaaatattgttgttcgagaggaggaacaaaatgagcttgaattgatgact
cgcaaatgtcctttagaagttaagggtggtccatcaaataaacatgggaaagtttcgatt
cttatacagttgtacatatccaggggttcaatcgatactttctcactagtttctgatgca
gcatatattagttcaagcttggctcgtgttatgcgggccttatttgagatttgtttgtgt
agagggtggagtgagatgtcttctttcatgttagagtactgcaaggccgtggatcgtcaa
atttggccccaccaacatcctctcagacaatttgacaaagatatttctgtggaaattcta
aggaagcttgaggaaagagaagtggacctagatcgcctatatgagatgcaggagaaagac
ataggagctttgattcgctatgctcctggagggaagttggtcaaacaatacttgggatat
ttcccaatggtccagttatttgctacagttagtccaatcacaagaactgttctgaaggtt
gatttgattattacccctgagtttgtctggaaagatcggtttcatggtactgtacaacgc
tggtggattttagtggaggattctgagaatgatcatatatatcactcagagctcttttca
ttaacaaagcgcatggccaaaggggaacctcagaaactatctttcacagttcctatcttt
gagccacaccctcctcagtacatcattcgtgcaatttccgattcgtggttgcatgcagag
gctttctacattatatcaatccagaaccttgcactgccagaggcacatactactcatacc
gaactccttgatctgaaaccccttcctgtgaccgcacttagctgtagaacctatgaagca
ttgtatgacttttcacactttaaccccatacagacgcaggctttccatgtgttgtatcac
acagatcaaaatgttcttttgggagccccaacaggaagtggtaaaaccatatcagctgag
cttgctatgcttcatctgtttaatactcaaccggatatgaaggttatctatatagcacct
ttaaaggctcttgttcgagaaagaatgaatgattggagaaagcgtcttgtttccaaactt
ggaaaacatatggttgagatgactggtgattataccccagatttgacagctcttttatct
acagacatcataatatctactcccgaaaagtgggatggcatcagtcgtaactggcacagt
cgaggttatgtcaagaaggttgggctcatgatattggatgagattcacttgcttggtgct
gatcgtggacccatactggaggttattgtctcccggatgagatatatatcatcacagaca
gatcgtccggttcgatttgttggcctttcaacagcattggcaaatgcacatgatttagct
gattggctgggtgttgaagaaaatggtcttttcaattttaagcctagtgttagacctgtt
cctcttgaagttcatatacagggatatcctgggaagtattactgtccaagaatgaatagc
atgaataagcccacatatgctgctatatgtacacattcacccataaaaccagttcttata
tttgtttcatcacgtcgccagacaagactgactgcacttgaccttattcagtttgcagct
tcagatgagcgcccaagacagttcctggctatacctgaagaagcacttcagatgatactt
tctcaagttgctgatcagaatctcaggcatactctgcagtttggcattgggttgcaccat
gctgggctgaatgataaagacagatctcttgttgaggaactttttgcaaacaacaaaatt
caggtgttggtttgcaccagtacattagcatggggtgtgaaccttccagctcatttagtt
gttataaagggaacagaatattttgatgcaaaagtaaagagatatgttgattttccaata
acagatattttacaaatgatgggtcgagcaggtcggcctcagtacgatcaacatgggaag
gcggttattctggttcatgaacctaaaaagagcttctacaaaaagtttctctacgaacca
tttccagttgaaagcagtctgagagagcagttgcatgatcacatcaatgctgagatcgtt
tctggaacaatttgtcacaaagaggatgcagtacattatcttacatggacctatttgttc
cgcagactgggggttaatccagcttattatgggttagaggatacagattctggaacttta
agttcttacttgtcaaggttaatgctgaacacatttgaggatcttgaagacagtggttgc
atcaagattgatgaagacaaggttgagccgctgatgttggggtcaattgcatctcagtat
tatcttaaatacacgactgtatcaatgtttgcttcaaatataggtgcagacacatcgctt
gaagttttcctccacatattagctggtgcttctgaatatgatgagcttcctgtgcgccat
aatgaagaaaatcacaatgccgacttgtccaacaaagttcgattcatggtcgatcaaaat
cttctcgatgatccacatgttaaagcaaatcttcttttccaggctcatttttcccgagtt
gaactacctgtcaccgactatgtaacagacttgaagtcagtgctagatcagtgtattcgt
atcattcaggcgatgatagatctgtgtgctaacagtggatggttctctagtaccatgact
tgtatgcgtcttttgcaaatggtcatgcagggactatggtttgacacagattctcccctg
tggatgttaccatgcatgactgatgatcttattactacattgagccagagaggaatctta
aatgtcctgcaattgttgtatcttcccaaagcaaattttcaaaatctcactggaagtgca
attgcctcaaagttacatgaggaactgcagcagtttcctcgtattcaagctcggataaaa
gttcagagacgacgttctgacgattcttgcgatagtctgaacataagattggagaaaaca
cacccccagaagaactcagctagggcttttactcctcgcttcccaaaggtaaaagacgaa
gcatggtggttggtcctgggaaatacttctacttctgaactgtatgcgttgaagagagtt
tctttcactaatgttttgcagacacggatggatgttcctttccgtgttaatgacttccag
ggtatgaagttggttgtagtttcagactgttatattggtttcgaacatgagtactctgtt
gaaacgctgctatga
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integrated database retrieval system
