KEGG   Primulina eburnea: 140809066
Entry
140809066         CDS       T11060                                 
Name
(RefSeq) histone deacetylase 19 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pebu  Primulina eburnea
Pathway
pebu03082  ATP-dependent chromatin remodeling
pebu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pebu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    140809066
   03083 Polycomb repressive complex
    140809066
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pebu03036]
    140809066
Enzymes [BR:pebu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     140809066
Chromosome and associated proteins [BR:pebu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     140809066
   HDAC complexes
    Sin3A-HDAC complex
     140809066
    BRAF-HDAC complex
     140809066
    REST complex
     140809066
    SHIP complex
     140809066
    MiDAC complex
     140809066
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     140809066
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    140809066
  Chromatin remodeling factors
   NuRD complex
    140809066
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 140809066
NCBI-ProteinID: XP_073022632
LinkDB
Position
13:34064515..34068870
AA seq 464 aa
METGGNSLTSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLHQMH
VLKPNPAREKDLCRFHADDYVSFLRNITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGHCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDVGFGKGKYYSLNVPLDDGI
DDESYQYLFKPIMGKVMEFFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGVELEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRHLLEEIRSKLLDYLSKLQHAPSVQFQERPPDTEIPEVDEDLDVAEERAETDFEMDV
DDECKPLPGRVKSEFLEAEAKLTGDIREGECNGEADLNPPKHIA
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggaaactgggggcaattcacttacatctgggcctgatggagtgaagcggaaagtgagt
tatttctacgacccggaggtcggaaattactattacgggcaaggtcacccaatgaaacca
cacaggattcggatgacacatgctcttcttgcccactacggattactgcatcagatgcat
gttctcaagcccaatcctgccagagagaaagatctttgcagattccatgctgatgattat
gtctcttttttgaggaacatcacccccgaaacacagcaggaccagctcaggcagctgaag
agatttaacgtcggcgaggactgtcctgtgtttgatggcctctactcgttttgtcaaact
tatgctggtggttccgttggtggagctgtgaagttaaatcatgggcactgtgatatcgct
ataaattgggctgggggattacatcatgcgaagaaatgtgaggcttctggtttttgctat
gtgaatgatatagtattggctatcttggaacttctcaaagtgcatgagcgagttttatac
gtagacattgatattcatcacggtgatggtgttgaggaagcattttatactacagacagg
gtaatgactgtttcttttcacaagtttggagattattttcctggaacgggggatataaga
gatgttggatttggaaaggggaagtattactctcttaatgttcccctagatgatggaatt
gacgatgaaagctatcaatatctatttaaaccaataatgggcaaggtgatggaatttttt
aggcctggtgctgtagtgttacaatgtggtgcagactcgctatctggggaccggttaggc
tgctttaatctctcaattaaaggtcacgcagagtgtgtcaaatttatgagatccttcaat
gtgccattactgttgttgggtggaggtggttacacaatacgtaatgttgctcgatgctgg
tgttatgagacaggggtagcacttggggttgaactggaggacaagatgccgcaacatgaa
tattatgaatactttggcccagattacactcttcatgttgctccaagtaacatggaaaat
aaaaactctcgtcatttactggaagagattagatccaagcttcttgattatctttcaaag
ctacaacatgcaccaagtgtccaatttcaggagcgaccacctgatactgaaattccagag
gtggatgaagaccttgatgttgcggaggaaagagctgaaaccgattttgaaatggatgtt
gatgatgaatgcaagcctttgcctggcagagtgaaaagtgaatttcttgaagctgaagca
aaactcacgggagacatcagagaaggcgagtgtaacggcgaagcggaccttaatcctcca
aaacacattgcttag

DBGET integrated database retrieval system