Primulina eburnea: 140809352
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Entry
140809352 CDS
T11060
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pebu Primulina eburnea
Pathway
pebu00040
Pentose and glucuronate interconversions
pebu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140809352
Enzymes [BR:
pebu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140809352
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
140809352
NCBI-ProteinID:
XP_073023047
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Position
13:complement(22747588..22749334)
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AA seq
401 aa
AA seq
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MEITLFPLTSLLLLLPLLTLSSTIPDPELVVQEFNEKVNASRRNLGSLSCGAGNPIDDCW
SCDPNWKNNRQRLADCAIGFGRGATGGRDGKIYVVTDSGDDAVNPKQGTLRYGVIQSEPL
WIAFSRDMVITLKQELMITSFKTIDGRGVSVHIANGPCITIQYVTNVIIHGINIHDCKVG
GNAYVRDSTKHFGWRGLSDGDGVSIFSSSNIWIDHCSLSNCQDGLIDAIRGSTAITISNN
YMTHHDKVMLLGHSDSYTRDKAMQVTIAFNHFGEGLSQRMPRCRHGYFHVVNNDYTHWRK
YAIGGSAAPTINSQGNRFLAPDDRVHKEVTKHETASQSQWKKWNWRSEGDLMLNGAFFTL
SGAGASSNFAKASSLSARPSSLVSSMTARAGVLDCKEGKAC
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcacacttttccctctaacatcacttcttctattgcttccacttctcacatta
tcttccacaattccagaccctgaactagtggtgcaagaatttaatgagaaagttaatgcg
tcgagaaggaatttgggatctctatcctgtggagcaggcaaccccatcgacgattgctgg
agttgtgatcctaattggaaaaacaataggcagaggttggcggattgcgcgattgggttc
ggaaggggtgccactggtggaagagatggcaagatttatgtagtgacggactccggagat
gatgctgtgaatccaaaacaggggactctgagatacggtgtcatccaaagcgagcctctg
tggatcgctttctcgcgcgacatggtcattacactgaagcaagaactcatgataacctcg
ttcaaaaccattgatggcagaggtgtgagtgtgcacatagctaacgggccatgcataacc
attcaatatgtcacaaatgtcatcatacatggcatcaacatacatgactgcaaggtaggg
gggaatgcttatgtgagggattctactaagcattttggatggagaggcttatcagatggt
gatggggtgtctatattcagttccagcaatatctggattgatcattgctcgttgtcgaac
tgccaagacggcctcatcgatgccatacggggctcgacagccatcaccatttcgaacaat
tacatgacacatcatgataaggtcatgctcctggggcatagtgatagttacacacgtgat
aaagccatgcaagtcaccattgcctttaatcatttcggagaagggctcagccagagaatg
ccaagatgcaggcatggctattttcatgttgtgaacaatgactacacacactggagaaag
tatgcgattggtggaagtgcagctcctactatcaacagccaaggcaatagatttcttgca
cctgatgatagggtccataaggaggtgaccaaacatgagactgcatcacagagccagtgg
aagaaatggaactggagatcggaaggcgacttgatgctcaacggtgcattcttcacgctg
tctggtgctggagcctcgtctaatttcgccaaagcgtcaagcttgagcgcgcgaccatca
tccctcgtgagctcgatgacagcaagggcaggcgtactcgactgcaaagaaggcaaagca
tgttga
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