KEGG   Primulina eburnea: 140809428
Entry
140809428         CDS       T11060                                 
Name
(RefSeq) histone-binding protein MSI1 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
pebu  Primulina eburnea
Pathway
pebu03082  ATP-dependent chromatin remodeling
pebu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pebu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    140809428
   03083 Polycomb repressive complex
    140809428
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pebu03036]
    140809428
Chromosome and associated proteins [BR:pebu03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     140809428
  Histone modification proteins
   HAT complexes
    HATB complex
     140809428
   HDAC complexes
    Sin3A-HDAC complex
     140809428
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     140809428
    PRC2.2
     140809428
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     140809428
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    140809428
  Chromatin remodeling factors
   NuRD complex
    140809428
   NuRF complex
    140809428
   NuRF complex (fruit fly)
    140809428
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 WD40_RFWD3 EIF3I Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_HPS5 eIF2A Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_RIG_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 140809428
NCBI-ProteinID: XP_073023149
LinkDB
Position
13:4400787..4404282
AA seq 426 aa
MGKDEDEMRGEVEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARLYDDDRSEYGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGHSTE
GYGLSWSQFKHGHLLSGSDDAQICLWDINAAPKNKVLDALQIFKIHEGVVEDVAWHLRHE
YLFGSVGDDQYLHIWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISTALHIFDCHNREEVFQVGWNPKNETILASCCLGRRLMIWDLSRIDEEQTPEDA
EDGPPELLFIHGGHTSKISDFSWNPCEDWVMASVAEDNILQIWQMAENIYHDDDDLPGDD
STSKGS
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggggaaggatgaggatgagatgcggggagaagtggaggagcgtttgattaacgaggag
tacaagatttggaagaagaacactccatttttgtacgatttggtcatcacccatgcgctg
gaatggccctcgctcaccgttgagtggttgcctgacagggaggagccaccgggcaaggat
tattccgtgcaaaaaatgattttgggaacccatacgtccgaaaacgagcccaattatctg
atgcttgcgcaggttcagcttcccctcgaggatgcggagaatgatgctcgactttacgat
gatgaccgctctgaatatggtggatttggatgcgccaacggaaaggtgcaaattattcag
caaataaatcatgatggggaggtcaaccgagctcgttatatgcctcagaactcatttatt
attgctaccaagacagttagtgctgaagtatatgtttttgactacagcaaacatccatcc
aagcctcctttggatggtacatgcaaccctgatttgaggctgaggggccacagtaccgaa
gggtatggtttatcatggagccagttcaaacatggtcatttactgagtggttctgacgat
gcccaaatatgcttgtgggacataaatgcagctcctaaaaataaggttctcgatgcattg
caaatatttaagattcatgaaggtgttgtcgaagatgtagcctggcatctcaggcatgaa
tacttgtttggttcggtgggagatgatcaatatctgcatatatgggatctccggactcca
tcagtgaccaagcctatacaatccgttgttgctcatcaaagtgaggtcaactgtctggct
ttcaatccattcaatgaatgggttgttgcgacgggttctactgacaagactgttaaatta
tttgatttgcgaaagatttcaacagcccttcacatatttgattgtcacaacagggaggaa
gttttccaagttggatggaatccaaagaatgagaccatcttagcttcctgttgtcttggc
aggagacttatgatctgggatcttagcaggattgacgaagaacagactccagaggatgct
gaggacggaccaccagagctgttattcatacacggtggtcatacaagtaaaatttcggac
ttttcatggaacccgtgtgaagattgggtgatggcaagcgttgctgaggataacatacta
caaatttggcagatggcggagaacatttaccatgatgacgatgatttacctggagatgac
tccaccagcaaaggctcctag

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