Primulina eburnea: 140809564
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Entry
140809564 CDS
T11060
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pebu Primulina eburnea
Pathway
pebu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
140809564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pebu03400
]
140809564
DNA repair and recombination proteins [BR:
pebu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
140809564
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
140809564
NCBI-ProteinID:
XP_073023335
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Position
13:complement(31833447..31838757)
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AA seq
692 aa
AA seq
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MARNKEGLVLVLDVGPSMHSMLPEMEKVCSMLIQKKLIFNKYDEVGVVVFGTADSKNDLT
EEVGGYENVMVLQGMKVVDGDCVATLQHLPRGTVHGDFLDALVVGMDMLIKKYGPTNKGK
KRICLITDTCSPIKDPYEGTKKDQVNTVVAQMVAHGMKMDCIVVGVKREWNVDEKIVEEN
DSLLNIFTNNSSSRKVCVESPTSLLGALRTRNISPVTIYRGDFELSSTMKIKVWVYKKTS
EEKFPSLKKYSDKAPLTDKFATHEIKVDYEYKSIAEPDRVVPPEQRIKGYRYGPQVVPIS
SAEWEAVKFKPEKGVKLLGFTDNANIMRHYYMRDVNIFIAEPGNTSAILAVSALARSMQE
MNKVAIIRCVWRQGQTNVVVGVLTPNVSEKNNIPDSFYFNVLPFAEDVREFQFPSFDKMP
PLMQPNDQQQEATDKFVQMLDLAPTGKGEVLQPNFTPNPVLERYYRCLELKSKDQNASVP
PLDETLRKITEPDPELLSQNRAVTNDFRLSFELKEHPKLKKSSRRLLTEKPSGSNNEVEG
ASADGQAMDAIEYKSEVKVEKIGNSNPVQDFEAMVSRRDGPQWVNLAIQNMKHKIFDLVE
NSFEGDAYQTALECLVSLRRGCILEQEPKQFNDFFRHLHKFCLERDLKSFTELLAVHEVV
LISNTEAAESDVSESEARSLMVKNEPKTEQGI
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaacaaggaaggtctagttttggtgcttgatgttggtccctcaatgcactct
atgctgccggagatggaaaaggtttgctccatgctcatacaaaagaagcttattttcaac
aagtacgatgaagtgggagttgtcgtgtttggaactgcagattctaaaaatgacctgaca
gaagaagtgggtggatatgaaaatgtgatggttctgcaaggcatgaaggtcgttgatgga
gattgtgtagcaactttacaacatctccctagaggaactgtacatggtgattttcttgat
gcacttgttgttggaatggatatgttaattaagaagtatggaccaacaaacaagggaaag
aaacgtatatgtctcataacagacacatgttctcctatcaaagatccatacgagggaaca
aagaaggatcaagtcaacacggttgttgcacagatggtggcacatggcatgaagatggac
tgcatagtcgttggggtaaaaagagagtggaatgtagatgagaagattgtggaagagaat
gattctctattaaatatatttacaaataattcttcctcaaggaaagtgtgtgtggaaagt
ccaacttcattattaggtgctctaagaactcgtaatatttctcctgttactatttatcga
ggtgattttgagctgagctctacaatgaaaatcaaggtatgggtctacaagaaaacatca
gaagagaaatttccctcattaaaaaagtattctgataaagcacctctgacagataaattt
gccacgcatgaaattaaggttgattatgaatacaaaagtattgcagaacctgatagagtt
gtgccgcctgaacaaaggatcaaaggttaccgctatggtccgcaagtagttccaatatca
tctgctgagtgggaggccgtaaagttcaaacctgagaaaggtgtgaagcttcttggtttt
accgacaatgcaaatataatgcgacactattatatgagagatgtcaacatcttcattgct
gaacctggaaatacaagtgccattcttgcagtttctgcattagctagatcaatgcaggaa
atgaataaagtcgccattatccgctgtgtttggagacaagggcagacaaatgttgttgtt
ggggtgctaacgccaaatgtatccgagaaaaataatattccagattcgttttacttcaat
gttcttccatttgccgaggatgtcagggagttccaatttccctcttttgacaagatgcct
ccactgatgcagccaaatgaccaacagcaagaggcaacagataagtttgtccaaatgctc
gatcttgctccaactggcaaaggggaagtcttgcaacccaacttcactccaaatccggtt
ctggagcgctattatcgttgtctcgaattgaaatctaaagaccaaaatgcaagtgtacct
ccacttgatgaaacccttagaaagataacagaacctgatcccgagcttctctctcaaaac
agagctgtgaccaatgattttcgactgtcctttgaactcaaagagcatccaaagttgaag
aaatcatctcgaagattattaactgaaaaaccgtctggatcaaacaatgaagtggaaggt
gctagcgctgatggtcaagccatggatgctattgaatataaatctgaagtcaaggttgag
aaaataggcaattctaatcccgttcaagattttgaggccatggtatctcgcagagatggt
ccacaatgggttaaccttgcaattcagaatatgaaacataagatttttgatttagtcgag
aattcttttgaaggagatgcttatcagacagcactcgaatgcttggtttcactgcgtaga
ggttgcattcttgagcaggagccaaaacagttcaacgacttcttccgccatcttcacaaa
ttctgcctagagagggacctcaagagcttcactgaattgttggcagtccatgaagttgtt
ctaataagcaacactgaagcagctgagagtgacgtttcagagagtgaagctagaagcttg
atggtgaaaaatgagccaaaaactgagcaaggcatctga
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