Primulina eburnea: 140810302
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Entry
140810302 CDS
T11060
Name
(RefSeq) uncharacterized protein
Organism
pebu Primulina eburnea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH
RT_RNaseH_2
RVP_2
Integrase_H2C2
Retrotrans_gag
Ty3_capsid
gag-asp_proteas
Asp_protease_2
Chromo
RVT_1
zf-CCHC
SH3_Tf2-1
Asp_protease
Motif
Other DBs
NCBI-GeneID:
140810302
NCBI-ProteinID:
XP_073024276
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Position
13:11524630..11530174
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AA seq
1285 aa
AA seq
DB search
MPPKRKVTEGDDRTPTTDRTTNVVDEFSKLIQEQAKVHCEQIQQLLSLHTSTQGHGQGRG
QGRVESNEGSSYDVFRRMNPLEFVGGADPLVALEWVKSLEAIFDYLKFTDRDRVSCTVFM
LVKAARIWWEATKVTVNVRELKWEEFKELFYSKYFSREVKAKKVKEFLELRQDSLSVAEY
TLKFEEGCVFVPFIAENDKDKGEHFLRGLKPEIRRDVHMAKVITYQDIVERALLAEHDEQ
EIEKERQLRRQAFQARGQGASTSARGGHKGKGKMEQRNKPSAPSSEMERPLCPKCGKPHK
GECLVGSGRCYRCKEMGHTAQKCPLSSDKGKVQGRIFTMTKEGANPDSSVISGNILISGK
EALTLIDTGATHSFMSEVFMHSLSREPTIMPLQFNIMLPSGDEICPTSILKACPVQIGSR
LLYADFIVIPMVAFDVILGMDWLYAYHAVINCVEKTVRFVTDGHEGDEIIGLGSSLSISL
ISCLQATKLLNKGCTGFLALVSDVNRDSNLQIQDIDVVRDYPDVFADDVPGLPPDREELL
DKGFIRPSSSPWGAPVLFVKKKDGSLRLCIDYRELNKTRELHREHLRIVLQTLRGKQLYA
KLKKCEFWLEQVAFLGHIVSKEGIAVDPSKIEAIKQWSIPKTVSEVRSFLGLAGYYRRFI
ADFSKIALPLTSLTRKTTKFEWTIECQQAFQILKDKLTSAPVLVLPCGTEDFVVYTDASK
QGLGAVLMQRGKVIAYASRQLKEYEKNYPTHDLELAAVVFALKIWRHYLYGEKCEIFTDH
KSLSYLFSQKELNMRQRRWLELVKDYDCTISYHPGKANVVADALSRKSSYLLGSMIQKPL
LLDLQRNEITLVSPGTVDQLSALVLRSTLIDRILKEQQLDIQLLELKNKNDLTGVSEFGL
NHDGLLTFRGRICVPRGDDIRKDILIEAHTTPYSVHPGSTKMYQDLRRLYWWPGMKKDIM
LFISECLTCQQVKIEHQRPAGTLQSLPIPQWKWEHITMDFVTGLPRTPKGYNSIWVIVDR
LTKSAHFLPVKTTFTMNQDAEVYVAEIVRLHGISVSIVSDRDPRALGTKLAFSTAYHPQS
DGQSERVIQILEDMLRACTIDFKGSWDSKLPLVEFTYNNSYQSSIGMAPYEALYGRKCRS
PLYWEEVERMKTAQSRQKSYADVRRRPLAFEVGDHVFIKIAPLKGVMRFGKKGKLSPRYI
DLLPNLSYEEVPIQILDRKVKVLRNKEIGIVKVLWRNHMIEEATWEPEEEMKHRYPNLFD
VGDSYGNEWESNQGYISNHCACGCK
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaaacgaaaggttactgaaggggatgataggacccctactactgataggact
accaatgttgtagatgaattcagtaaattaatacaagaacaggcgaaagttcattgtgaa
caaattcaacagttgttgagcctgcatacctcaacccaaggtcatggtcaaggaagagga
cagggtagagtggaaagcaacgaaggtagttcttatgatgtattcaggcgaatgaaccct
ctcgaatttgttggtggtgccgatccactcgtagctcttgaatgggttaaatctttggag
gctatatttgactatttgaagttcactgatcgcgatagagtgagctgtactgtgtttatg
ctagtgaaagctgctcgcatctggtgggaagctaccaaagtgactgtcaatgttcgcgag
ttaaaatgggaagagttcaaagagttattttattccaagtacttttcaagagaagttaaa
gcgaagaaggtcaaagaatttcttgagttgaggcaagactccttgtctgttgctgaatat
acattgaaatttgaagaaggttgtgtctttgtgcctttcatcgccgaaaatgataaagac
aaaggagaacacttccttcgtgggttgaaaccagaaattcgaagggatgttcatatggcc
aaggtgatcacttatcaagacattgttgaaagagccttacttgctgagcacgatgaacaa
gaaattgaaaaggaacggcaattaagaaggcaagcttttcaagcgagagggcaaggggca
agtactagtgctcgaggtggtcacaaaggaaaaggtaaaatggaacaacgcaataaacct
tctgcgccttcttcagagatggagcgaccattatgtcctaaatgtggcaagccacataaa
ggggaatgtctagtgggaagtggccgatgttatagatgtaaagaaatggggcatacagca
cagaaatgtcctctctcctctgataaaggaaaagttcaaggcagaatctttacgatgaca
aaagaaggagccaatcctgattcttcagtcatatcaggtaatattctaatatctggaaag
gaagcacttacattgattgatactggtgcaactcattcctttatgtctgaagtatttatg
cactccttatctcgcgaacctactatcatgcctttacaattcaatattatgttgccttct
ggtgatgagatttgtcctacaagtattcttaaggcatgtccagtacagataggttcgaga
ttgttgtatgctgattttattgtaattccaatggttgctttcgatgtcattttgggtatg
gattggttatacgcttatcatgctgtgatcaactgtgtggaaaagaccgtgaggtttgta
actgatggtcatgagggtgatgaaattattgggctaggttcctcgttaagtatttccctt
atttcttgtctccaagctacaaaattattgaataaggggtgtactggttttctggcctta
gtatcggatgtgaatagggatagtaatttgcaaattcaggatattgacgtggttcgggat
tatcctgatgtatttgctgatgatgtgcctggcttacctcctgatcgagaggagctatta
gataaagggtttatccgtcctagttcctcgccatggggagctccggtcttgttcgtaaaa
aagaaagatggatcgttgaggttatgcattgactatcgtgagctcaacaagacacgagaa
cttcatagggagcatttgaggatcgtattacagacattgagggggaaacaattatatgcg
aaattaaagaaatgtgagttttggttagagcaagtggcgtttttaggccatattgtgtca
aaagaaggaatagcagtcgacccgtccaagattgaagctattaagcaatggtccattcca
aagacagtttcagaggtacggagttttcttggcttggctgggtattacagaagattcata
gcagacttctcgaaaatagcattgccattgacaagtttgacacggaaaactaccaagttt
gaatggacaattgaatgccaacaagctttccaaatcttgaaagataagttaacttctgcc
cctgtattagtacttccttgtggtactgaggattttgttgtgtatacagatgcctcaaag
caggggttaggtgctgtgttgatgcaacgtgggaaagtaatcgcttatgcttctcgtcag
ctaaaagaatacgagaagaattatcccacacatgatttggagttggcagctgtagtcttc
gccttgaagatatggcggcattatttatatggtgagaagtgtgaaatttttacagatcat
aaaagtttgagttatttgttttcgcagaaagaattgaatatgaggcagcggaggtggttg
gaactggtaaaggactatgattgcaccattagctatcatcctggaaaagctaatgtcgtt
gcagatgctttaagccgtaaatccagttatctattgggttccatgattcagaaaccgtta
ttactcgatttgcaaaggaacgaaataactctggtatctccaggtacagtagatcagtta
tctgcactagttcttcgctctactttgattgatcgtattctaaaggagcaacaattggat
attcagttattagagttgaagaataaaaatgatttaacaggagtttctgaattcggtttg
aatcatgatggtttattgacctttcgaggtagaatttgtgttcctaggggtgatgacatt
cggaaagatatacttattgaagctcatacaacgccttattcagttcatcctggcagtacc
aaaatgtatcaagatcttcgacgtctttattggtggccaggtatgaagaaagatatcatg
ttatttatttctgaatgtctaacctgtcagcaggttaagattgaacatcaaagacctgct
ggaactttgcaatctctcccaatacctcagtggaaatgggagcatatcactatggacttc
gtaacaggacttccaagaacaccaaagggttacaactccatctgggtaattgttgatagg
ttaaccaagtcggctcattttctgccagtcaaaacgacgtttacaatgaaccaggatgct
gaagtctatgtagctgagattgtaagacttcatggaatctctgtatcaattgtatctgat
cgtgacccgagagccttgggcacaaagttggcttttagcacagcatatcatcctcaaagt
gatgggcagtcagagagggtgattcaaattcttgaagatatgttacgagcctgtacgatt
gatttcaagggaagctgggattctaagttacctttggtggaattcacgtataataacagc
taccagtcttcaatcggcatggcaccctacgaggctttatatggaagaaagtgccgatct
ccattgtactgggaagaggtagaaagaatgaagaccgctcagtctagacagaaaagttac
gctgatgtacgacgacggccattggcattcgaggttggtgatcacgtgtttattaaaata
gctcctctcaagggagttatgcgatttggcaagaaaggtaaactaagtcctcgatacatt
gatcttttacctaacctaagctacgaagaagtaccgattcaaattcttgatcgcaaggta
aaagtattaagaaacaaagagattggtatagtaaaagttttatggcggaatcatatgatt
gaagaggcgacttgggaacccgaggaagaaatgaaacatcgttatcccaatttattcgat
gttggtgatagttatggaaatgaatgggaatccaatcaaggttacattagcaaccattgt
gcttgtggttgtaagtag
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