Primulina eburnea: 140810716
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Entry
140810716 CDS
T11060
Name
(RefSeq) LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 5-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pebu03021
]
140810716
03036 Chromosome and associated proteins [BR:
pebu03036
]
140810716
Transcription machinery [BR:
pebu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
140810716
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
140810716
SLIK complex
140810716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
Niban2
Motif
Other DBs
NCBI-GeneID:
140810716
NCBI-ProteinID:
XP_073024696
LinkDB
All DBs
Position
13:27014188..27059710
Genome browser
AA seq
1648 aa
AA seq
DB search
MIEQIELKDKNHSQQLTVNSNRIQDNVATNIEELPKSTPSHDNGEDDDKNLRVGNAQSPM
RRMTVGGKWGSSFWKDFQPTVSQSGEESENKGHQIVPADEMFSDEYYEQDGDYHSDMPNH
RRTMNQSSGFSLRMPPCPVALSGIIGKSKLLKANRYGHDDADFEDAGDDDDKDGDDPDDA
DFDPDFGAADEHWGTKDRDEDWDAEESDEEDNVTDDDLDISDEDDIYIKKSRANSAKSGQ
TSKSTRERSLAPSARRKIGRTSIEEDEKESSAENSEYYSDGGFRNARRDPTARRKNGGRY
ESIKASVRNNELQTSGRSVRKVSYVESDESEDVDEGKNMRTHKDEIEEDAGDAIEKVLWH
QPTGMAEEALRSNNSTEPVVLSYFFDSEPDWNEIEFLIKWKGQSHLHCQWKPLSELQNLS
GFKKVLNYTKKMTEEIKYRKMLSREEIEVNDVSKEMDLDIIKLNSQVERVIAARVTNDGL
GNVVPEYLVKWRGLSYAEATWEKDVDISFGQDAIDEYKAREVVIMVQGKTVDFQRKKSKG
SLRKLDEQPEWLKGGTLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQ
NSQQIPGPFLVVVPLSTLSNWAKEFKKWLPEMNVIIYVGTRASREVCQQYEFYNDKKTGR
VTQLDTLLTTYEVLLKDKAVLSKIKWNYLMVDEAHRLKNSEALLYTTLSEFSTKNKLLIT
GTPLQNSVEELWALLHFLDPDKFKVKDDFVQNYKNLSSFNEMELANLHMELKPHILRRVI
KDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKYC
NHPFXFESADHGYGGDANFLGSSKLERIILSSRKLFLLDKLLNRLHETGHRVLIFSQMVR
MLDLLAEYLSIKGFKFQRLDGSTKAELRQQAMDHFNAPGSEDFCFLLSTRAGGLGINLAT
ADTVIXFDSDWNPQNDLQAMSREPELIGIGQQEVVNIYRFVTSKSVEEDILERVKKKMVL
DHLVIQKLNAEGRLEKKESKKGSSFDKSELSAILRFGAEELFREDKNDEESKKKLLSMDI
DEILERAEKVEDKATEEGEGHELLSAFKVANFSSAEDDGTFWSRMIKPEAVSQAEDALAP
RAARNIKSYAEAIPPERINKRNKGVEPQDRLSKRRRADSGYSLPVLEGATAQVRGWSHGN
LPKRDATRFFRAVKKFGDDSQIGLIASEVGGVVESAPMEAQIELYDALIDGCREAVKGET
LDPKGPLLDFFGVPVKADEVLCRVKELQLLTKRISRYEDPISQFRALAYLKPATWSKGCG
WNQKDDARLLLGIHYHGFGNWEKVRLDERLGLTKMIAPVELQHHETFLPRGPQLKERAAQ
LLEMEVAAVGGKNSNAKVSRNNAKKQKETHPLSRGKGRLGKSDSPRKVRTNKSRAKKSEK
IEPLVKEEGEMSDNEEVYEQYKEVKWKEWCADVMIYEEKTLRSLQKLQSVSATLPKEKVL
SKIRNYLQLLGRRIDQIVSDYEQERMTTRLWNYVSTFSNMSGEKLQQIYSKLKQEQHITG
GGGPYHIIGQAAAFMQRDLDMGKFEAWKRRKRAETDVSHVQHPYQRSTGNGTRLPDPNSS
GXQFSNGKPYRTQRGGFPSRQSFSSGTK
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacagattgaattgaaagataaaaaccattcacagcagctaactgttaatagc
aatagaatacaagataatgtagccacaaacattgaggaactaccaaaatctacaccaagt
catgataatggagaagatgatgacaaaaatttgagagtaggaaatgcacagtcacctatg
aggagaatgactgtgggtgggaagtggggttcgagtttttggaaggatttccagcccact
gtgtcacagtctggggaggagtctgaaaataagggacatcaaattgttcctgcagatgag
atgttttctgatgaatactatgagcaggatggagattatcacagtgatatgccaaatcat
cgcagaactatgaaccaatcaagtgggtttagtttgagaatgccaccttgtcctgttgct
ttgagtggtatcattgggaaatcaaaattgttgaaggctaacaggtacggtcatgatgat
gctgacttcgaagatgctggcgacgatgatgacaaagatggagatgatcctgatgatgct
gactttgatcctgattttggggctgctgacgagcactggggaaccaaggatagagatgaa
gattgggatgctgaagaatctgatgaagaagataatgtcacggatgatgatttggatatc
tctgatgaagatgacatctacataaagaaaagtagggccaattcagcaaagagcggccaa
acttcgaagtccaccagggaaagatcacttgcaccatccgctcgtcgaaagataggcaga
acttctattgaggaagatgaaaaggaatcttctgctgagaactcagaatattatagtgat
ggtggttttagaaatgcaaggagagatcctactgctcgcaggaagaatggaggtcggtat
gagtcgattaaagcttctgtccgtaacaatgaactacaaacttcaggtcgttcagtgcgg
aaagtatcatatgttgagagtgatgaaagtgaagatgttgatgaagggaaaaatatgagg
acacataaggacgagattgaagaagatgccggtgatgcaatcgagaaggtattgtggcat
caaccaacgggtatggctgaagaagctttgagaagtaataactcaaccgagcctgtcgtt
ttgagctatttttttgactcagaaccagattggaatgagattgagtttttaataaaatgg
aaaggccagtctcatttacattgtcaatggaaaccactttctgaactgcagaatctcagt
ggttttaagaaggttttgaattacaccaaaaaaatgacggaggaaatcaagtatcgaaag
atgttatcccgtgaggagatcgaggtaaatgacgtgagcaaggaaatggacctggacatt
atcaaactaaacagtcaggtggagagagtgattgctgccagggtcaccaatgacggtttg
ggtaatgtagtaccagaatatttggtcaagtggcgtggactctcatatgctgaagctact
tgggagaaagatgttgatatttcatttggccaggatgctattgatgagtacaaggctcgc
gaggttgtcattatggtgcaagggaagactgttgatttccagcggaaaaaaagcaaagga
agtcttaggaagcttgatgagcagcctgagtggttgaaagggggaactcttcgagattat
cagctcgagggtttgaactttttagttaacagctggagaaatgatacaaatgtaatattg
gctgatgaaatgggacttgggaaaactgtccagtcagtttcaatgcttggatttttgcag
aattctcagcaaattccaggcccatttcttgttgttgttccattatctacattatcgaat
tgggcaaaagaatttaaaaagtggttgccagaaatgaacgttattatttatgttggaact
cgtgctagccgtgaggtgtgtcagcaatatgaattctacaatgataaaaaaacaggcagg
gtcacgcagttagataccttattaactacatatgaggttttattgaaagataaagctgtc
ctctcaaaaatcaagtggaactatcttatggttgatgaagcccataggctaaagaacagc
gaagctttgttgtacacaacattatcagaattcagcacgaagaataagttgctaatcact
ggcaccccattgcaaaacagtgttgaagagctgtgggctttgcttcactttcttgatcca
gacaagtttaaggtgaaggatgactttgtgcagaattacaagaatcttagttcttttaac
gagatggagcttgctaatcttcacatggaattgaaaccccacattcttagaagagttata
aaagatgtagagaaatctttgcctccaaagattgaacgtatacttagagttgagatgtcc
ccgctgcagaaacagtactacaaatggattttggaacgcaacttccatgatttgaataaa
ggagtccgagggaatcaggtttcgcttttaaatattgtagtggagctgaagaaatattgc
aaccatccatttntgtttgaaagtgcagaccatggttatggtggggatgcaaattttctt
ggaagctctaaactggaacgaataattctaagcagcaggaaactcttccttctcgataag
ctgctcaacaggttgcatgaaacaggtcaccgtgttttgatattttcgcagatggtaagg
atgttggatttactagctgaatatttatcaatcaaaggattcaaatttcaaagacttgat
ggtagtactaaggctgagttgcgtcagcaggctatggatcattttaatgctcctgggagc
gaggatttctgttttcttctttccactcgtgccggtggattgggtatcaatcttgcgaca
gccgacacagttattnattttgattctgattggaatccacaaaatgatttgcaggccatg
agccgagagcccgagctcataggaattgggcaacaagaagtggtgaacatttaccgattt
gttacaagcaagagtgttgaggaagatatcttggagagggtgaagaaaaagatggttctg
gaccacctagttattcaaaaactgaatgctgaaggtaggctggagaaaaaggagtcgaag
aaaggaagttcgtttgataaaagtgagctttctgcaattctgaggtttggggccgaggaa
ctttttagggaggacaaaaatgacgaagaaagcaagaaaaaacttctgagtatggatatt
gatgagattcttgaaagagcagagaaggttgaagacaaagcaactgaagaaggagaaggg
cacgagttgttgagtgcttttaaggtagccaatttcagtagtgctgaagatgatggcacc
ttttggagccgcatgataaaacctgaagctgtctcgcaagcggaagatgctttagctcca
cgggcagctcgaaatattaaaagctatgccgaggctataccacctgaaaggattaataaa
cggaacaagggtgtggagccccaggatagactttcaaaacgtcggagagctgattctggt
tattctcttcctgtgcttgagggtgctactgctcaagtaaggggctggtctcatggaaac
ttgcccaagagagatgcaacccggttttttcgagcggttaagaagtttggagatgatagc
caaattggcttaatcgcctcagaagttggtggtgtagttgaatctgctccaatggaggca
caaattgagctttatgatgctttgattgatggatgtagagaagcagttaaaggagagaca
cttgatccaaaggggcctctattggatttttttggtgtgcctgtaaaagctgatgaagtt
ttatgccgtgttaaagaacttcagcttcttaccaagaggattagccgctatgaagatcct
atttctcaattcagagcacttgcatatctcaaacctgccacatggtctaagggctgtggc
tggaatcagaaggacgatgcaaggctgctgcttggtattcactatcatggatttggcaat
tgggaaaaggtaagattagatgaaaggcttggccttacaaaaatgattgctcctgttgaa
cttcaacatcatgagacttttttacctcgaggtccccaactgaaagaacgagcagcacaa
cttctggaaatggaagtggcagctgttggcgggaagaattctaacgcaaaagtgagccgt
aataatgcaaaaaaacagaaagaaactcatccattgtcacgtgggaaaggcagactaggg
aagtctgattctcccaggaaggttcgaaccaacaaaagtagagctaagaaatccgagaag
attgaaccattagtgaaagaggaaggtgaaatgtccgataatgaagaagtttatgagcaa
tataaggaagttaagtggaaggaatggtgtgcagatgtcatgatatacgaagaaaagact
ttgagaagtctccaaaaacttcagtctgttagtgcaactctacccaaagagaaggtgctt
tccaaaattaggaattacttgcagcttcttggtcggaggattgaccaaattgtttcagat
tatgagcaagaaaggatgaccacacgattatggaattatgtatctacattttcaaatatg
tctggtgagaaacttcaacaaatttattccaaacttaaacaggagcaacatattactggc
ggcgggggaccatatcacatcattggtcaagctgcagcatttatgcagagggatcttgac
atgggtaaatttgaagcttggaaacggagaaaaagagctgaaacagatgtttctcatgtt
caacatccatatcaaagatccactggtaatgggacgcgattacctgatccgaactcttct
ggcnnacaatttagtaatggaaagccttacagaacacagcgaggtggctttccttcaagg
caaagtttctcatctggtaccaagtaa
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integrated database retrieval system
