Primulina eburnea: 140811525
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Entry
140811525 CDS
T11060
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pebu Primulina eburnea
Pathway
pebu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140811525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140811525
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140811525
mRNA degradation factors
5'-3' decay
Decapping complex
140811525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
DUF5536
Beta-prop_EML_2
Beta-prop_HPS5
Ribosomal_uL24m-like
GerPC
Motif
Other DBs
NCBI-GeneID:
140811525
NCBI-ProteinID:
XP_073025559
LinkDB
All DBs
Position
14:31233273..31241517
Genome browser
AA seq
1435 aa
AA seq
DB search
MATPGNSNPPGGAPPFDMPKLFRPSTSPAASPASSPHPQNITNSDSAFTNPNLISAPFPP
PSASFPPNTTAGGGQYSYLPQTSPFHHQPQFHHLPMYNPPSNSREFANVNSQRSMSYPTP
TLQPQVPVPSSPHHLNFQASASSQNPNNHGARLMALLSAPPSTLDIPNESTMPMPQNLPT
SSGSDLSMPKFVNNLPSGPGLLVSHQGPVMRMPSSKLPKGRHLSGDHLIYDIDVRLPGEV
QPQLEVTPITKYGSDPGLAVGRQIAVNKTYICYGLKLGAIRVLNINTALRSLLKGLAQRV
TDMAFFAEDVHLLASASVDGRVYVWKINEGPDEEDKQQITGQIVTAIQITGEGESFHPRV
CWHCHKQEVLTVGIGMHILKIDTTKVGKGGKISADEPLKFTIDNLIDGIQLVGSHDGEVT
DLSMCQWMTTRLVSASVDGTIKIWEDRNPLPIAVLRPHGGQPVNSVTFLAAPHRPDHIIL
MTGGPLNREVKLWVSASEEGWLLPIDAESWRCTQTLELKSSEARIEEAFFNQVIALSQAG
LLLLANAKRNAIYVVHLEYGPNPAATCMDYIAEFTVTMRILSFTGTSESLPNGEQVVQVY
CVQTQAIQQYALDLSQCLPPAIGNLVHEKSESNVSREASIIEGHIDLESSGIKATGVSIT
SSAHSSSIHDSGLENKPTVRYPVDPVSSESPSLQEFAPSSIESKPMPSPVNASDGSLSSV
ASPSLPLSPRLSRTHSGFRNPMSSLEHGVLSTDRGVEPKIVEYTVDRQMDTIHSNLSDVA
SLDGDSRNYDNKHSQDDIPLAFNHPINFRHPTHLITPSEILMANSSSEVIHKTEAQSEVE
LKIQDVLMSNDTRNSVVEVKVVGETKFNQNIDDESQEELQTFLSEKRENIFCSQASELGV
EMARECRGISTETYIVEEDRQFDGTGGTETVAQPSNVEEEIHDSRKDGPSSVIESSIPVL
APQPTPSAKGKKQKGKSAQGSGPSSPSPSAFDSADSSNEPGISYSTPVESQIYSMQEILH
KLVALQKDVQKQMTTMIAVQVTKEGKRLEASLGRNMEKAVKANSDALWARLQEDNAKEEK
ASRERAQQVTNMISSFLNKDLPSLIDKTVKREVSSHGQSVARAIIPTIEKAIFTSIAESF
QKGVGDKAVNQLEKSVNFKLEAVVARQIQSQFQTSGKQALQETLKSSLEVSVIPAFEMSC
RAMFEQVDSVFQKGMVEHTAAAQQQFEASHSSLALVLRDAITSASSMSQTLSNELLEGQR
KLVALAVAEANSKAANPLTDQLSNGPLGSLHEKLEVDPTKELSRLVVERKYEEAFIAALH
RNDVTVVSWLCSHVDLLTLLAMNPLPLSQGVLLSLLQQLACDISKETPRKLTWMREVLSA
INPADPVIMVHVRPIFEQVYQIMNHHHTIPTTAGSELSNIRLIMHVINSMLMGSK
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccccggaaattccaatccacctggcggagctcctccattcgacatgcccaag
ttattcagaccttccacttccccggctgcatcacctgcttccagtccccatccccaaaac
attaccaacagtgacagcgccttcactaaccctaatttaatttcagctccctttccgccc
ccctcggcgtcttttccaccgaacacgactgccggcggagggcagtattcctatcttcct
caaacctcgccgttccaccaccaaccccaattccaccatcttcctatgtacaatcctcca
tccaactctcgggaatttgcgaacgttaactcccagaggtccatgtcctatcctacgccc
accctccaaccccaagttccagtgcctagttcccctcaccaccttaatttccaagcctcg
gctagttcccaaaaccctaacaaccacggtgctcgtttgatggcgcttttgagtgctcca
ccttcgacgctggacattccaaatgagtccacaatgccgatgccccaaaatctccccact
tcttcaggctcggatctttccatgccaaaatttgtgaataatttgccatctgggccggga
ttattagtttcacatcagggccctgtgatgcggatgccaagtagtaaacttcccaagggg
aggcatttgagcggcgatcatttgatttatgatatagatgtcaggttgccaggagaggtc
cagccccagcttgaggttacgcccattaccaaatatgggtcggacccaggacttgcagtg
ggcaggcaaattgcagtgaataaaacatatatatgctatggacttaagttgggggctatt
agagtgcttaatatcaatacagccttaagatccttgctcaagggcctagctcagagggtc
acagacatggctttctttgccgaggatgttcaccttttagctagtgcaagtgtcgatggt
cgtgtttatgtgtggaagattaatgaaggtcctgatgaagaagacaagcagcaaattact
gggcaaattgtcactgccattcaaattactggagaaggagagtcttttcatccccgagtt
tgttggcattgccataaacaagaagttcttactgttgggattggtatgcacattttgaag
attgatactacaaaagtaggaaaaggaggaaaaatctcagcggatgaacctctaaaattc
accattgataatttgattgatggcatccaacttgttggtagtcatgatggggaagtgact
gacttgtctatgtgtcagtggatgaccacccgtttggtatctgcttcagtagatggcacg
attaaaatttgggaagatcgaaatccattaccaatagcagttctccggcctcatggtgga
caacctgttaattctgtcacatttttggcagctcctcatcgcccagaccatataatactt
atgactgggggacctctgaatcgggaagtgaagttatgggtatcagcaagtgaggaaggt
tggttacttcctattgatgctgaatcatggcgctgcacgcagacattggaattaaagagt
tcagaagctcgaatagaagaagctttcttcaatcaagtgatagccttgtcacaagctggt
cttcttttattggcaaatgccaaaaggaatgctatatatgttgtgcatctggaatacggt
cctaatcccgctgcaacatgcatggattacatagccgaatttacggtcacaatgcgaata
ctgagtttcacaggtacaagcgagtcgctacctaatggggagcaagttgttcaggtgtat
tgtgtccagacccaggctattcagcagtatgcgttggacttgtcacagtgtctgccacct
gcaataggaaatttagtgcatgagaagtcagaatctaatgtttcgcgtgaagcttctatt
atagaaggacatatcgatttggagtcttctggcattaaagcaacaggggtatcgataact
agttcagcacactcatcatccatacatgatagtggcttggagaataaacctactgtgaga
taccccgtggaccctgtttcttccgagtcacccagccttcaagaatttgctccctcaagt
attgaaagcaaaccaatgccttcacctgtaaatgctagtgatggtagtctttcctctgtt
gcttcaccttctctacctttgagccccaggctgtccagaacacattctggttttagaaat
ccaatgagcagcttggagcatggtgttttgagtaccgatcggggtgtagagcctaaaatt
gttgaatatacagttgaccgacaaatggacaccattcatagtaacttgtctgacgttgct
tcattggacggtgattcaagaaactatgataataagcattctcaagacgatatccccttg
gcattcaatcatcccataaatttcagacaccccacgcatctgattactccttctgagatt
ttgatggccaattcatcctctgaggtgattcacaaaacagaggcccaaagcgaggttgaa
ctaaaaattcaagatgtgttaatgagcaatgatacaaggaattctgttgtagaggtaaag
gttgtgggcgaaacaaaatttaatcaaaatatcgacgatgaatcgcaagaagaacttcag
acttttctgtcggagaagcgggaaaatatcttttgctctcaagcatccgaactaggggtt
gagatggcccgagaatgccgtggcatatcaactgaaacttatatagtagaggaagatcgg
cagtttgatggaactggtggaactgaaacagttgcccaaccttcaaatgtagaagaagaa
attcacgactccagaaaggatggtcccagcagtgtcattgagtcatcaattcctgtgctg
gctccacaacctacacccagtgccaaagggaagaagcagaagggaaagagtgctcaggga
tctggcccatcttcaccctcaccaagtgctttcgattcagcagattcttctaatgaacca
ggcatcagctatagcactcctgtagaatcacaaatttattccatgcaagagatcttgcat
aagcttgtagctctgcaaaaagacgtgcagaagcagatgacaacaatgattgctgtccaa
gttaccaaagaaggcaaaagacttgaggcatcattgggacgaaacatggagaaagctgta
aaagccaattctgatgctttatgggctcgcttgcaagaagataatgcaaaagaggaaaag
gcatctcgagagcgagcacaacaagtaacaaatatgataagcagtttcttaaacaaagac
ttgccttcattgatagataaaactgtgaaacgagaagtttcttcacatgggcaatctgtg
gctcgggctatcattcccacaattgagaaagcaatattcacttctattgctgagagcttc
cagaaaggggtgggcgataaagctgttaatcaactggaaaaatcagtcaacttcaagctt
gaagctgtagttgctaggcaaattcaatctcaatttcaaacttctggcaagcaagctctt
caggaaacactgaaatcgagtttggaagtttctgtgattccagcgtttgaaatgtcatgc
agggcaatgtttgagcaggttgattccgtgtttcaaaaaggaatggttgaacatactgca
gcagctcagcagcagtttgaggcttcacattcatcacttgcacttgttttgagggatgct
ataacttctgcgtcatcaatgtctcaaactttgagcaatgagttgcttgagggtcaaaga
aaattggtagctcttgctgttgcagaagcaaattctaaagcagcaaatcctttgactgat
cagctgagtaatggtcctttgggtagtctacacgagaagctcgaggttgatccaacaaaa
gagctttctagattggtagttgagcggaaatacgaggaggctttcattgctgccttgcat
aggaatgatgttactgttgtatcatggttatgttctcatgttgatttgcttacgcttttg
gccatgaatccgcttccattgagccaaggggtactcctctctcttctacagcaattggcc
tgtgatatcagcaaggaaacccctcgaaaactaacttggatgagggaggttctaagtgct
ataaatcctgccgacccagtgattatggtgcacgtacgtcccatattcgagcaagtatat
caaataatgaatcaccatcacaccattccaaccactgccggttccgaactttcaaacatt
cgcttgatcatgcatgtaatcaattccatgcttatgggctcaaaatga
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integrated database retrieval system
