Primulina eburnea: 140811638
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Entry
140811638 CDS
T11060
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
pebu Primulina eburnea
Pathway
pebu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140811638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pebu03041
]
140811638
Spliceosome [BR:
pebu03041
]
Complex A
U1 snRNP components
U1 related factors
140811638
Complex B
140811638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
140811638
NCBI-ProteinID:
XP_073025755
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All DBs
Position
14:2927445..2937797
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AA seq
1066 aa
AA seq
DB search
MANNPQFTGMQPLRPRIVGGHVGPPPSPLPPMLMQFRSAVPPPPPPQPPRPYIPVTPQQF
QPVGHSNMGMPPHPMPIQYPQGAPLPPPLPPAQRTGLVLPQGPPPPLTDFQPNRPVMPAS
VQPQISNNFMPSFSGPVISPAAYTVSSSSSGLQQMNVGAISQNQSMPQTNVPNFSISGHP
WYPMGNQNLQSTIQPQQEVELSAGGQPWFATGNQNLKPLTPFQQTGEQNTGAQQLFPSTN
QNVQPGIPSRQTEELSDTEKLTKPAVIEKALSEWKEYTSRDGKKYYYNKRTGISLWEKPL
ELMTLTERADASTDWREFTTPEGRKYYFNKVTKQSKWAIPDEVKLARERVTMISCEGTPL
MKHVTSLASAGVHTSEIPASFPNANNSSSQGGKTIVSSPVSVEPAVNPEPAATSGLSGKL
EEAAYTQLDVTGSHDPVETASSIVAADTSVPIELDSSITTPIRTANSISPREAAPPSVDE
TSNGGLEETNAIFVISASGSIIAPEEKKVEHGHVVYESKEEAKNAFKVLLATANVGSDWN
WDQAMRVIINDRRYGALRTLGERKQAFNEFVGQKKKQEVEERRARQKKAREDFKKMLDES
EDLTSSTRWGKAISMLEHDERFQAVERAKDREDLFEDHLEDLKKKERAKALEERKRHKTE
YLEFLKSCDFIKASSQWRKIQHRLETDQRCSRLEKIERLEIFQEYIRDLELVEEEQRKLR
MEDMRKAERKNRDEFRKLMEEHVVNGILTANTHWRDYCTKVKDMPAYLAVSSNTSGSKAK
DLFEDVVDDLEKQYLEDKEKIEGAIKNEKISLSTSCTLEDFKAALQKAITSAKISDINLT
LVYNELLEITKEKEEKEAKKRKRLAEDFYDFLFTLKEITASSKWEDCKPLVGDRFLGDES
FFQEIFDNFIIELKEKAKEKERRRREEKAKKEKRREDKERRNKDRRVESKKGRERRKKGE
TDSDDSNSHSIEENRRSRDRSKKHRKRRMDYFDDTNFDGDDKDRSRSHRHITHTKKSKQI
EKQSWSADVDTENESKKRKRDNRDGRNEDVDVEERNEEPCEDGEVR
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaatcctcagttcactggcatgcagcctctccggcctcgcatagttggtggt
catgtgggtcctcctcctagccctcttcctcccatgttgatgcaatttcgatcagcagtt
ccacccccgccgccgccacagccacctcgaccatacattcctgtgactcctcagcaattt
cagcctgttggacattcaaacatggggatgcctcctcatcccatgccaattcagtatcct
caaggagcgccactgcctcccccactgcccccggctcaaagaactggtcttgttttgccg
caaggaccacctccgcctctgacagatttccagcctaatagacctgtgatgcctgcttct
gttcagcctcaaatctcgaataatttcatgcctagtttttctggtcctgttatttctcca
gcggcatacactgtatcctcgtcatctagtggcctacagcaaatgaatgtaggcgcaata
tctcagaatcagtcgatgccccagactaatgttcccaatttttctatcagtggacaccca
tggtatcctatggggaatcagaacttgcaatcgaccatccaaccacaacaagaggtggaa
ctaagtgctggaggacaaccatggtttgcaactgggaaccagaatttaaaacctctcacc
ccttttcagcagaccggggagcaaaatactggtgcacaacaattgtttccaagtacaaat
cagaatgtacaaccaggaataccttctcggcagactgaggaactctctgacacggagaaa
cttaccaagcctgccgtcattgaaaaggctttatcagaatggaaagaatacacctctcgt
gatggaaaaaaatattattataacaaacggacagggatatctctgtgggagaagccttta
gaattgatgaccctcactgagagggcagatgcatcaactgactggagagagttcactact
cccgaaggaagaaagtattacttcaataaagttacgaaacaatcgaaatgggccattcca
gatgaagtcaagttggctcgtgaaagggtgacaatgatttcatgtgaaggaacaccatta
atgaaacatgttacttcccttgcctcagctggtgttcatacttctgagatcccggcttct
tttcccaatgcaaataattcatcttctcaaggtggtaaaacaattgtgtcaagcccagtt
tcagtggaacctgctgttaatccagaacctgcagccacttctggattatcaggcaaacta
gaggaggctgcttatacacaactagatgttacagggtcacatgatcctgtagaaactgct
tcttcaattgttgcggcagatacatcagtccctattgagcttgacagctctataactaca
ccaataagaactgctaatagcatatcacctcgggaagctgcaccaccatctgttgatgaa
acttcaaatggaggtctggaggaaaccaatgcaatatttgtgatttctgcaagcggcagc
atcattgcacctgaagagaaaaaagtagagcatggacatgtagtctatgagagtaaagag
gaggcgaagaatgctttcaaagttctcttggcaacagcaaatgttggctctgattggaat
tgggaccaggccatgagagtgataataaatgaccggagatatggtgcactaagaactctt
ggtgaaagaaagcaagcttttaacgagtttgtgggacaaaagaaaaaacaggaagttgaa
gagaggcgtgccagacagaagaaagcgcgggaagatttcaagaaaatgttagatgaatct
gaagatttgacttcatcaacaagatggggcaaagcgatatctatgcttgaacatgatgaa
cgttttcaagctgttgaacgagctaaagatcgtgaggacctctttgaagaccatttagag
gatctcaagaaaaaggaacgagcaaaggctttggaggagcgcaaacgtcacaagacagag
tatttggagtttctaaaatcttgtgattttatcaaggcgagtagccaatggcggaaaatt
caacaccgtttggaaactgatcagagatgctcacgcctagaaaaaattgagcgcttggaa
atcttccaagaatatatacgagatctagagctggtagaagaggaacaaagaaaattgaga
atggaggacatgaggaaagcagaacgtaaaaaccgtgatgaatttcgaaagctgatggag
gaacatgttgttaatggcatacttactgccaatactcattggcgtgactattgtacaaag
gttaaagacatgcccgcgtatctcgcagtatcttcaaacacctcagggtctaaagcaaaa
gatctgtttgaggatgtcgtagacgacctcgaaaaacagtatttggaggacaaggagaaa
attgaaggtgcgataaagaatgaaaagatatccttgtctacatcttgtactcttgaagac
ttcaaggctgcacttcagaaagcaattacatcagcaaaaatatctgacatcaatttaacg
cttgtatataatgagttgttggaaataactaaagagaaagaagaaaaagaagctaagaag
cgtaaacgtctagctgaagatttctatgacttcctattcactttaaaggaaataacagca
tcctcgaagtgggaggattgcaaaccacttgttggagatcggtttcttggagatgaaagc
tttttccaggaaatctttgacaacttcattattgaactaaaagaaaaggcaaaagagaag
gagcgaaggagaagagaagaaaaggcaaagaaggaaaaaaggagagaggataaggagaga
aggaataaagatcggagagtcgaaagcaaaaagggtagagagagacgtaagaaaggtgaa
accgatagtgacgactctaattctcacagtattgaagagaatagaaggtcgcgagacagg
agcaagaaacatcggaagcggcgcatggactatttcgatgataccaattttgatggtgac
gataaagataggtctaggtctcatagacacatcacccataccaaaaagtcgaaacagatt
gagaagcaatcttggtctgcggatgtggatacggaaaacgagagtaagaaacgcaaaagg
gataatcgggatggcaggaacgaggacgttgatgtcgaggagcgtaatgaagagccgtgc
gaggatggagaggttcgatag
DBGET
integrated database retrieval system
