KEGG   Primulina eburnea: 140812939
Entry
140812939         CDS       T11060                                 
Name
(RefSeq) protein PAT1 homolog
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
pebu  Primulina eburnea
Pathway
pebu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pebu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    140812939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pebu03019]
    140812939
Messenger RNA biogenesis [BR:pebu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     140812939
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     140812939
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 140812939
NCBI-ProteinID: XP_073027422
LinkDB
Position
14:complement(31341152..31346624)
AA seq 805 aa
MDEYGDGGSIQESSNLQDLEPFTANPTVFDATQYAFFGNNAVEEVELGGLEDDEGVLGAV
GFNEEGLQLEREEVAKSGDAFGSLSDVDDLSVTFSKLNKTVSWPAGVGGDWGSRESSSAA
EWAQEGDFIWFDRQALDTETGHGTKNWPSQPYSSARFIESNSLLRTSSHPEQQQQHPHQQ
QNKHNHFSSEPILIPKSTFTSYPPPGRLQQNSPNGQSSHTNIMHQPGGLQIPLTSSNILP
FPNPQLPLNTLTHGSQFGGNLPQMPHGRLQNQWMNQNSPFPGDRSGLPNNILPQPLSNQN
GLMPPQIMSHQRSLQTRMHHPFQPAFTQLSGLQPQLFNPHLSVSPPMMNNFEMIGSPDLR
DQRAMSMMRSRQGMRYPPQGYDTSGQKVESGWPRFKAKYMSTDEIENVLRLQLAATHSND
PYVDDYYHQACLARKSVDAKFRHHFCPTNLSDGPTRARSIAEPHHFLQVDALGRVSFSSI
RRPRPLLEVDSSNSSNTVGADSKFTEKPLEQEPMLAARVTIEDGICLLLDVDDIDRFLQF
NQLHDGGVLLRQRKHVLLEGLASSLQLVDPLGKNGHTVDLAPKDDFVFLRLVSLPKGRKL
LLRYLQRLLPGELTRVVCMAIFRHLRFLFGNVPTDPEAMASTANLAIAVSSCVRGMELKS
LAACLASVVCSVEHTPLRPIGSPTGDGATVVLKSVLDRATELLTDPQAAGNCSMPNRSFW
QASFDAFFSLLTKYCFNKYDSVVQSVIQGSPDTPDVGSDVAKAISREMPVELLRASLPHT
NEQQRKLLLEFAQRSMPVLGSSSQI
NT seq 2418 nt   +upstreamnt  +downstreamnt
atggatgaatacggagatgggggcagtattcaagagtcctccaatcttcaggatctcgaa
ccatttactgcaaatccaacagtatttgacgctacacagtatgcattctttggtaacaac
gcggtggaagaagttgagctcgggggattggaagatgatgagggagttctcggcgcagtt
ggattcaatgaagaggggctccagctcgagagagaagaggtggctaaatcaggtgatgcg
tttggatcactatctgacgttgatgatctttcagtcacattttcgaagttgaacaaaaca
gtcagttggccggctggagttggtggagactggggatctagagaaagctcatctgctgct
gagtgggcgcaggagggagatttcatttggtttgatcgacaagcccttgatactgaaact
ggccatggtactaaaaactggccctcacaaccatattcttctgcacgcttcatagaatcc
aattccttgctcaggacatcttcacatcccgaacaacagcagcagcatccacatcaacaa
cagaacaaacataatcacttttctagtgagccaattctgattccaaaatcaacattcact
tcgtatccaccacctggcagattacagcaaaattcaccaaatggccagtctagccacact
aatatcatgcatcaacctgggggcctgcaaataccattaacttcctccaatattttaccc
tttcctaatccacagctcccattaaataccttgactcatgggtcacaatttggtggaaat
ttgcctcagatgcctcatggtcgactccaaaatcaatggatgaaccagaatagtccgttt
cctggtgatcgatctggtctcccaaataatattttaccccagccattatcaaatcaaaat
ggtttaatgcctccacagataatgtctcatcaacgttctttgcaaactagaatgcaccat
ccatttcagcctgcctttacccaattatctgggttgcaacctcaactatttaatcctcac
ttatctgtgtcaccaccgatgatgaacaactttgaaatgattgggtcccctgatttgaga
gatcaaagagctatgtcaatgatgagaagtagacagggaatgcgctatcctcctcagggt
tatgacacaagtggccagaaggttgagagtgggtggccaaggttcaaggctaagtatatg
tctacagatgaaattgaaaatgttcttaggttgcagcttgctgctactcatagcaatgat
ccgtatgtggatgattattatcatcaagcttgcctagcaagaaaatctgtggatgcaaaa
tttagacatcatttctgtccaactaatttgagtgatgggcctaccagagctcgttctatt
gccgagccacatcactttctccaggttgatgctcttgggcgagtttccttctcttcaata
cgcagacctcgaccgcttcttgaagttgactcctcaaattcttctaatactgttggggct
gattcaaaattcactgagaagcccttggaacaggaacctatgcttgctgccagggtgact
attgaggatggcatctgccttttacttgatgttgacgatattgacagatttttacagttt
aatcaactgcatgatggtggggtcctgttgaggcagaggaaacatgttctactggaaggt
ttagcatcatcacttcagcttgttgaccctctagggaaaaatggccacactgtagattta
gctcccaaagatgactttgtgttcttaaggttagtctctcttcccaagggtaggaagctc
ttgttgaggtatcttcaacgtcttttgccaggcgaactgactcgagtagtctgcatggcc
atcttccgccatttaagattcttgtttggtaatgttcctactgatcctgaggcaatggca
tcaactgcaaatcttgcaatagctgtatcatcgtgtgttcgtggtatggaacttaaatct
cttgctgcctgtcttgcatcagtggtatgttcggtggaacatactcctcttcgtcccatt
gggagtcctactggagatggagcaacagttgttctgaaatctgtccttgatagggcaact
gagcttctgactgaccctcaagctgctggaaactgcagcatgccgaaccggtctttttgg
caggcctcatttgatgccttctttagtcttcttactaaatactgctttaataaatatgac
tctgttgttcaatctgtcatccagggctcgccagacacacctgatgttgggtctgatgta
gccaaagcaattagcagagaaatgcccgttgaactcttgcgagcaagtcttcctcacaca
aatgagcagcagagaaaactcctgttagaatttgcccagcgatctatgcctgttttgggc
tctagcagtcagatttga

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