Primulina eburnea: 140813344
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Entry
140813344 CDS
T11060
Name
(RefSeq) vacuolar sorting protein 18 isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pebu Primulina eburnea
Pathway
pebu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
140813344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pebu04131
]
140813344
Membrane trafficking [BR:
pebu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
140813344
Hops complex
140813344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf_RING_Vps8
zf-rbx1
zf-RING_UBOX
zf-RING_11
RPN1_RPN2_N
zf-RING_Vps41
Nup54_57_C
zf-ANAPC11
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
140813344
NCBI-ProteinID:
XP_073027951
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All DBs
Position
14:complement(31441181..31454001)
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AA seq
987 aa
AA seq
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MEHRRHVFSVDLLERYAAKGKGLITCMTSGNDVIVLGTSKGWIIRHDFGVGDSFDIDLSV
GRSGEQSIHRVFVDPGGSHCIATVVGGGTSDTFYTHAKWAKPRILSKLKGLVVNDVSWNK
QLITEASTREILLGTDDGQLYEIAVDEKDKREKYIKFLFKLNELPEAFTGLQMETAHIHN
GTRYYVMAVTPTRLYSFTGIGSLDSVFASYANRAVHFMELPGEIPNSELHFFIKHRRAIY
FAWLSGAGVYHGGLNFGAQHSSPNGDENFVENKALFDYSKLGEGVLVKPSSLSVSEFHFL
LLLGNKVKVVNRISERIVEELYFDQTPDAVSRGILGLCSDASAGLFYAYDQNSIFQVSVN
DEGRDMWKVYLDLKEYAAALANCRDALQRDQVYLMQAETAFTSKDFLRAASFYAKINFIL
SFEEITLKFISIGEQDALRTFLLRKLDNFAKDDRCQITMISTWATELYLDKINRLLLEDD
AELDSGSSEYQSIITEFRAFLSDCKDVLDEATTMKLLESYGRVDELVFFASLKEQYDIVV
HHYIQLGEAKKALRVLQKPNVAIDLQYKFAPDLIMLDAYETVESWMITKDLNPRKLIPAM
MRYSSEPHAKNETHEVIKYLEYCVHRLQNEDPGVHNLLLSLYAKQDDESTLLRFLQCKFG
KENPNSPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDVELAMAEADK
VEDDEDLRKKLWLMVAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALI
DDFKEAICTSLEDYNEQIEKLKQEMNDATHGADNIRNDIGALAQRYAVIKRNEECGVCRK
KILDASGDYRMARAYTSVGSMAPFYVFPCGHSFHSHCLIAHVTKCTTETQAEYILDLQKQ
LTLLGDEPRKEMNGSLKEEDPIMSLTHGEKIRSRLDDAIASECPYCGDLMIREISLPFIL
PEETDEVESWEIKPHNLGTQKSIPLTV
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggagcatcggcggcatgttttctctgtagatttgctggagaggtacgcggcgaaggga
aaaggactgatcacatgtatgacatccggtaatgacgtcatcgtgctggggaccagtaaa
ggatggatcattcgtcacgattttggcgtcggcgattcttttgatatcgatctatctgtg
ggtagatctggggagcagtcaatccacagggtttttgttgaccctggaggtagccactgt
attgctactgtagtcggcggtggaacttctgatacattttatacgcatgcaaagtgggcc
aagcctcgaattttgagcaaactgaaaggtcttgttgtgaatgatgtttcttggaataag
cagcttataactgaagcttccaccagggaaattcttctcggcacagatgatggccaactt
tatgaaattgcagtagatgagaaggataagagagaaaaatacatcaagtttttgtttaag
ctgaacgaacttccagaagctttcacgggtttgcagatggaaacagcacatatacacaac
ggaactagatattacgtcatggccgttacacccacccggctttattctttcacaggaatt
ggttcgttggattctgtttttgccagttatgccaaccgtgcagttcacttcatggaactg
ccaggtgaaattccaaacagtgagctacactttttcataaaacacagaagagccatatat
tttgcatggctatctggagcaggagtctatcacggtggtcttaattttggagcacaacac
agttcacctaatggggatgagaactttgtggagaacaaggctctcttcgactattcaaaa
ttaggtgaaggtgtattggtcaaacctagttcactttcagtatcggagttccatttcctt
ctcctgctagggaacaaagttaaggttgttaatagaattagtgaacggattgtcgaggaa
ctttatttcgatcaaacacctgatgcagtttcaaggggtattctaggtttatgtagtgat
gcatctgctgggcttttctatgcgtatgaccagaattctatctttcaggtatctgtgaat
gatgaaggccgagacatgtggaaagtttatttagacttgaaggaatatgctgcagctttg
gcaaattgtcgtgatgccctccaaagagatcaagtatatctgatgcaggctgaaactgct
tttacttctaaggattttctcagagctgcttcattttatgcgaagattaactttattctg
tcatttgaagaaatcactttgaagtttattagcataggggaacaggatgctttaaggaca
ttcctgttgcggaagcttgataattttgcaaaggatgacagatgccaaattacaatgatt
tccacgtgggcaactgaattatatttggataaaattaatcgactactgttggaagatgat
gctgagttggatagtggtagctcagagtaccaatccattatcacagaatttcgtgccttt
ttgagcgactgcaaggatgtgttggatgaggctaccaccatgaaacttcttgagagctat
ggtagagtagatgaattggtattcttcgctagtcttaaagagcagtacgatattgtggtt
catcattatattcagcttggagaagcaaagaaagcactgcgagttcttcagaaacccaat
gttgccatagaccttcagtacaagtttgctccggatcttatcatgttagatgcatatgaa
actgttgaatcatggatgataactaaggacctgaacccaagaaaactcattcctgcaatg
atgcgctattcaagtgaaccacacgcaaagaacgaaactcatgaagtgatcaaatatttg
gagtattgtgttcatcgcttgcagaacgaggacccgggggttcataatttgttgctctcg
ttgtatgctaagcaggatgatgagagcactcttctgcggttcctgcaatgcaagtttgga
aaagagaatcccaattcccctgaattcttctatgatccaaaatatgccttgcgtctttgc
ctcaaggaaaaacggatgcgtgcttgtgtccatatatacagtatgatgtctatgcacgaa
gaagcagttgctcttgctttacaggttgatgttgagcttgcgatggctgaagccgataaa
gttgaagatgatgaagacttgaggaagaaactttggcttatggttgctaagcatgtcatt
gaacaagagaaggggacgaagagggagaatataagaaaggcaatagcatttctcaaggaa
actgatggacttctaaagatcgaagatatcttaccctttttcccagattttgcattgatt
gatgatttcaaggaggcgatctgcacatcactcgaagattacaatgagcaaatcgaaaaa
ctcaaacaagagatgaatgatgctactcatggtgctgacaacataaggaatgatattggt
gcccttgcacaaagatatgctgtaattaagcggaatgaagaatgtggggtttgccgaaag
aaaatattagatgcatctggtgactatcggatggccagggcttatacttcagttggatcg
atggcacctttttatgtttttccttgtggacattcctttcattcgcattgtttgattgcc
catgtcactaaatgcactactgaaacccaagctgaatacatactagatttgcaaaagcag
ttgactttactgggtgatgaacctaggaaggaaatgaacggcagcttgaaagaagaggat
ccgataatgagcttgacgcatggagaaaagattcgatcacggttggatgatgcaattgct
agtgaatgcccgtattgtggtgacttgatgatccgtgaaatatctttacctttcatcctc
ccggaggagacagatgaggtagaatcatgggaaataaagccacataatcttggaactcag
aagagcataccattaactgtgtga
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