Primulina eburnea: 140813542
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Entry
140813542 CDS
T11060
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
pebu Primulina eburnea
Pathway
pebu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140813542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140813542
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140813542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
CCDC-167
Motif
Other DBs
NCBI-GeneID:
140813542
NCBI-ProteinID:
XP_073028198
LinkDB
All DBs
Position
15:35949988..35966656
Genome browser
AA seq
2039 aa
AA seq
DB search
MPLFLSDEEFQGLSHDASLVADKADVFIREIYNQLETVKAEADAAAITAEQTCSVIEQKY
VALTAELSALQSQHSELITALDKRDLEFGQLQSNKQQFLLQSVEKDGLIERLKLEGSELH
KSKRQLMEILEQKDLEISEKNATIKSYLDKIVNLTEIGASKEAHQADLESELARLNATTS
RLLQEKELLERHNSWLNEELTAKVDDIIQLRKENGELEADMSSKLADAVSEHKLSADYLK
LHKDKVSELEEKLASMEEELLSTKKEAAAAEQHFTAEISTVTKLLDLYKESSDEWSKKAG
DLEGVIKALETHLNQVEDEHKERLGKEEFTMKQMEMESDELKEKLQTFEAELERLRKENE
LKHPSLSGFTANSWMNLVDTGELVEDDRAIVPKIPGGVSGTALAASLLRDGWSLAKMYAK
YQEAADALHHEELGRKQTQAILERVLYEIEEKARVIMDEREEHERLVEAYSALDQKLQHS
LSEHSALETNIRELKASLKRQERDRAVAQKEIVQLQKQVAVLLKECRDVQLRCGYVAYDD
EMITVPVQLNAESDAESILSVRLLTFKDINGLVEQNSQLRSLAHDLSQQIEKKEAELKEE
YEMELQKHTADTASKVNAVLQKAEEQGQMIESLHASVAMYKKLYEEGELKLRTAYRLPTE
TAPELGSQKVIQLRESSLESSSKIPEQAFERVKSLEEELSKSKSDLISLRAECDKLSLEA
RFAKEKLARFMKEFEHQREEHNRVIARNVEFSQLIVDYQRKVRESSDSVNDSNKLCQKLT
MEVSILKHEKEILQNSEKRAFDEVRSLSERVHRLQASLDTIQSTQEVREEAKTIERRKQE
EYVKKIEQEWAEAKRELQQERDNARNIALERESTLNSAFRQVEELRKELASALQSVAAVE
LRAAVAEARCADSAKITEPSRVKDSDPVEGDPSSSASEKILANFREEIENLRGEARSSKD
HMLQYKSIAQVNEAALKQMESTYENFRTEANDVRKSLEAELLSLKGQAKELENECKLKTE
EAIAASARNEEALTGALFEISSLKEDCSVKMSQILLMESQFSTLKEDLEQEHQRWLSAQA
NYERQVILQSETIQELTKTSQALASFQDEVSELRKVADVLRNENNELKSKWETEKLALEV
YKNVADSKYNEVNELNKILHSRLEALHIKSAEKERGIAFGSTSQTCTDDDGLQNVMNYLR
RSKEITETEISLLKQEKLRLQSQLESVLKSSEDAQTSLRSERAKSRSALFTEEDFKSLQL
QVRELTLLRESNAQLREENRHNFEECQKLREALQKDKNEIENLEKLLRSRETDLEACRKE
IDMQKMEKVHLEKRINELLEKCRDVDVNDYNRLKESSQLMQSNLREKEAQIEELEKKMSE
KQDSASRLEQDLAMCRTELNERDTKISELLQSEASLKSEAEKHKRLNIQGRRKFENLLKE
KEDQIKEMQAQVKQLEDAKQAKRNLGDSAGEQALKEKEKEKDSRIQTLERALERHREELR
KEKEDHLKEKERSQKIRKTILDSREIVEQQKIKLTDELRNHKEALKALQDEVEKLKGSGG
SQSESTSVVQQFSSTILDEMSSAYFQAVENFEQVVQPACDELEPASAKDAPAPSLENNSA
VGASTGQSIALVSQIPSASASNVASKTVEEKERRFGLGKVNARTARKLVRPNITKPKEPQ
SDVDMSEAYEINPLSSSQNAETQENVALPTAPLVRKRSSASILSDGQEMPVPEEAIPDMV
APVVKKAKGSESLQDGGEEKPASPSKLVEVVLTEESSDDVANIRQSVNEELVDAEKDEFE
NVEEQIEETTVDEQIQADPANEAGAGEVADEKSEKPSEAVLSPELLRDQIEQDIQQIVTE
FGSDVEEGEMVADLADNDGDSYIPGSRQLPAEQSVEPENSPGMEPFIPVTFDVGEIDPPL
TPEEKNDGSDVIGNIVESSDKLNDGSDTGGETDQFSGAVTTTTDSNVDPVASEQGDTGGK
PVSPLNSSSTTINLQERARERGHLRQLGRNTSSSSRPHTRVVRVRGNRGGRNGRGQPRG
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtttctgtctgatgaagaattccaggggctatctcacgacgcctcactggtg
gcggataaggcggacgttttcattcgagaaatttacaatcaacttgaaaccgttaaggca
gaggctgatgccgccgccattacagcagagcaaacttgctctgtaattgaacagaaatac
gttgctcttacagcggagctttccgccctccaatcacaacactccgaactcatcaccgcc
cttgataaacgtgatcttgaattcgggcaactacaatccaacaagcaacaattcctcctc
cagtctgtggaaaaggatgggttgattgaaagattgaagctggagggatcggagctccat
aaatcaaagaggcaattgatggaaatcctggagcagaaggatttggaaatcagcgagaaa
aatgccaccattaagagctatcttgataagattgtcaacttgactgagatcggggcatca
aaagaagcacatcaagctgacctagaatctgaattggcgcgattgaatgctacaacatcc
cgccttttgcaggaaaaggagcttcttgagaggcataattcatggctaaatgaggagtta
acggccaaggtggacgatatcatccaactgcggaaagagaacggggaacttgaggcagat
atgtcttccaagcttgctgatgctgtaagtgaacataaactgagcgctgattatttgaag
ttgcacaaggataaagttagtgaattagaggagaagcttgcatccatggaagaggagtta
ctgtcgactaagaaggaagctgcggcagcagagcagcattttacagctgaaatttcaact
gttaccaaactcctggatctgtacaaggaaagttctgatgaatggtcgaaaaaggctggg
gatcttgagggagtcattaaggctttagaaactcatttaaatcaagtggaagacgaacat
aaggagaggcttgggaaggaagagtttacaatgaagcaaatggaaatggaatcggatgag
ttgaaagagaaacttcagacttttgaggcggagctagaacgtttgaggaaagaaaatgag
ctaaagcatccttctctgagtggttttacagctaattcatggatgaacttggttgatacc
ggtgaattggttgaggatgaccgagcgattgtaccaaagattccgggtggagtttcagga
acagcgttagcagcttcactccttagggatggatggagtctggccaaaatgtatgccaaa
tatcaagaagctgctgatgcactgcatcatgaggaactgggaagaaagcaaacacaagct
atcttggagcgggtactttatgaaatagaagaaaaagctagggtcatcatggatgaacga
gaggaacacgaaagattggttgaagcttactccgctcttgaccaaaaactgcagcattcc
ctatccgaacattctgctttggaaacaaatatccgagagttgaaggctagcttgaagagg
caagagcgtgatcgtgctgttgctcagaaggagatcgttcaacttcagaagcaggtggct
gttcttctgaaggaatgtagagatgttcagttgcgttgtggatatgttgcctatgatgat
gagatgatcactgttcctgtccagttgaatgctgaatcagatgctgaaagtattttatct
gtgaggctgttgaccttcaaggatattaatggattagttgaacaaaattcccagctgcgg
agccttgctcatgacctttcacaacagattgagaaaaaagaagcagagttaaaggaagag
tatgagatggagcttcagaaacatacagctgacacagcatctaaagttaatgcggtgttg
caaaaagctgaggaacagggacagatgattgaatcacttcacgcctctgtggcgatgtac
aagaagttgtatgaagagggagaacttaaacttcgcacggcttatcgtctacccacggaa
acagcaccagaacttggaagtcagaaggtcatacagttaagagaaagcagtcttgaatca
tcaagtaagataccagaacaagcttttgagcgtgtgaaaagtcttgaggaagagttatca
aaatccaagagtgacctaatatcacttcgagctgagtgcgataagctgtctctggaagca
agatttgccaaagaaaaactggccagattcatgaaggaattcgagcatcagagagaagaa
cataatagagtcatagctagaaatgttgaattctctcagttgatagttgactatcagagg
aaagtacgtgaaagttccgattctgtaaatgactccaataaactttgccagaagttaaca
atggaggtctcaatattgaagcatgaaaaggaaatactgcagaactctgagaagagagct
tttgatgaagttcgtagtttgtcggagagggttcaccgtttgcaggccagtttggatacc
atacaaagcactcaggaagtccgtgaggaggccaaaactattgagaggaggaagcaggaa
gagtatgtaaaaaaaattgagcaagaatgggctgaggcaaaaagggagcttcaacaagag
cgagataatgctcgaaatattgcactcgagcgtgaaagcaccttgaatagtgcctttaga
caagttgaagaattaagaaaagaattggccagtgccttgcaatccgtagctgctgtggag
ttgagagctgctgttgcagaggctcgatgtgctgattcggcgaagattacggaaccttct
agagtgaaggattctgaccctgtcgaaggtgatccatcctcttctgctagtgaaaagatt
ctggcaaacttccgtgaggaaattgagaatttgagaggggaggcacggtctagcaaagat
cacatgcttcagtataagagcattgctcaggtaaatgaagcagccctcaaacagatggaa
tcgacctatgaaaattttagaactgaggccaatgatgtgagaaaatctcttgaagccgag
cttctttcacttaaagggcaagccaaagaacttgaaaatgaatgcaaattgaaaactgag
gaggcaattgctgcatccgctaggaatgaagaagctcttactggtgctttatttgaaatt
tccagtctgaaagaagattgctcagttaaaatgtcacaaatcttgttaatggaatcacaa
ttctctactctgaaagaagatttggagcaggagcatcaacggtggctttctgcccaagcg
aattatgaaagacaggttattctacagtcagaaacaatacaggagttgactaaaacatca
caggcattggcttcatttcaagatgaagtatctgagctccgcaaagtggcagatgtgctg
agaaatgagaataatgagctgaagtcaaaatgggagacagaaaagctagctcttgaagtt
tataagaatgtggccgatagtaaatacaatgaagtcaatgagctgaacaagatcttgcac
agtcgccttgaagccttgcacatcaaatcagctgagaaagaaagaggaatagcttttgga
agcacttcccagacttgtactgatgacgatgggttgcaaaatgttatgaattatctccgg
cggtcaaaggaaataaccgaaacagagatttctttgttgaaacaagagaagcttcgattg
caatcacagctagagagtgttttgaagtcatcagaggatgcacaaacatcacttcggtca
gagagagcaaaatctcgatccgcattattcacggaggaagacttcaaatctctccaactt
caggttagagagctgacactacttcgggagagcaatgcacagctcagagaggaaaaccgg
cataattttgaagaatgtcagaaactccgtgaagcattacagaaggataagaatgaaatt
gagaatttggagaaacttcttcgaagcagagaaactgatttggaagcttgtagaaaagaa
attgatatgcagaagatggaaaaggtgcatcttgaaaagagaattaatgagttgctagaa
aagtgcagggatgttgatgttaatgattacaatcgcttgaaagaatcttctcagctgatg
cagtcgaatttaagagagaaggaggcacaaatcgaagaacttgagaaaaaaatgtccgag
aaacaagattcagcgtcacgtttagaacaggaccttgcaatgtgcagaacagaactgaat
gagagagataccaagattagtgaactcttgcaatctgaggcttcgctgaaatctgaggcg
gaaaaacataagcgattaaatattcagggaaggaggaagttcgaaaacctgttgaaggag
aaggaagatcaaatcaaagagatgcaagcgcaggttaaacaattagaagatgccaagcag
gctaaaagaaatttaggagattctgcaggcgaacaagctctgaaagaaaaagagaaggag
aaagactccagaatacagactttggagagggcgttggagaggcacagagaggagttgagg
aaggagaaagaagaccatctcaaagaaaaagaaagaagtcagaaaattcgtaaaacaatt
cttgactctcgtgagattgtggagcagcagaagattaagctcacagatgagctaaggaat
cacaaggaagctctgaaagcgcttcaagatgaagtagagaaactaaagggctctggaggc
agtcaatctgagagtacatctgtggttcaacaattttccagtaccattttggatgaaatg
tcatcggcatacttccaggctgtagaaaattttgaacaggttgtgcaaccagcttgtgat
gaacttgaacctgccagcgctaaagatgctccggctccctctctcgaaaataattcggct
gttggagcttcaactggtcagtcgattgcgttagtctcccaaattccatcagcttccgct
tctaacgttgcttcaaaaactgtggaagagaaagagagaagatttggtttaggaaaggtg
aatgctagaacagcaaggaaactggtccgtcctaatattacgaaacctaaagaacctcaa
agtgatgtggacatgtcagaagcatacgagattaatcccttgtcatcttcgcagaatgca
gaaactcaagaaaatgtagccctaccaacagcaccgcttgtgcggaagcgctcatcagca
tcaattttatctgatgggcaggagatgcctgttccagaggaagcaatccctgatatggta
gctcctgtggtgaaaaaggcaaaaggttcagagagcctacaagatggtggtgaagaaaag
cctgcctctccttcgaagcttgttgaggttgtactcactgaagaatcatcagatgatgtg
gcaaacattcggcaaagtgttaatgaggaactggttgatgcagaaaaggatgagtttgaa
aatgtagaggagcagattgaagaaacaacagttgatgaacagattcaggcagatccagca
aatgaagcaggagcaggtgaagttgcggatgagaaatcggagaaaccaagtgaggctgtc
ctgtctccggagctattgagagatcaaattgaacaagacatccagcaaatagtaacagaa
tttggctctgatgtggaagagggagagatggttgcagacttggcggataatgatggtgat
agctatatcccaggatctagacaacttccggctgaacaatcggtagaaccagaaaattca
ccaggaatggaaccctttattcctgtaacctttgatgtcggggagattgatcctcccctg
actccagaggagaagaacgatggcagtgacgtgattggaaatattgttgaaagttcagat
aaacttaatgatggaagcgatacaggtggagaaacggatcagttttctggggctgtaact
actaccacggacagtaatgtagatcctgtggcttctgaacaaggtgatactggagggaaa
ccagtatcacctctaaatagcagctcaactactattaatttacaggagagggcaagggaa
aggggacatttaagacagttgggccgaaacacttcttcctcgagccgacctcataccaga
gtagttcgtgttcgtggtaatcgtggtggccgcaatggacgaggacaaccacgtggttag
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integrated database retrieval system
