Primulina eburnea: 140813840
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Entry
140813840 CDS
T11060
Name
(RefSeq) phytochrome B-like isoform X1
KO
K12121
phytochrome B
Organism
pebu Primulina eburnea
Pathway
pebu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
140813840
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Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
HATPase_c
HisKA
GAF
PAS_9
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
140813840
NCBI-ProteinID:
XP_073028697
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Position
15:complement(7083659..7088734)
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AA seq
1148 aa
AA seq
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MSASGSRSTNANNPQYSQAQARAQSSGRGSPRCHAKNAHNDSGRNRGGDSMSKAVAQYTV
DARLHAVFEQSGESGKSFDYSQSVKASTQSVPEQQITAYLSRIQRGSHIQPFGCMIGVDE
FSFRVIAYSENAVEMMGLMPQSVPSLEKPEILTFGTDVRALFTPSSSVLLERAFGAREIT
LLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARNEDPALSIAGAVQSQKLAVRAISHL
QSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKGPGLEPYIGLHYPS
TDIPQASRFLFKKNRVRMIVDCRATPVRVVQDEALVQSLCLVGSTLRSPHGCHAQYMANM
GSIASLTLAVIINGNDEDGVEGRNSMRLWGLVVGHHTSARCIPFPLRYACEFLMQAFGLQ
LNMELQLASQFSEKRVLRTQTLLCDMLLRDSPTGIVMQSPSIMDLVKCDGAALYYQGKYY
PLGVTPTEAQIKDIIAWLLAFHGDSTGLSADSLADAGYSGAAALGDAVCGMAVAYITSRD
YLFWFRSHTAKEIKWGGAKHHPQDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDASH
SLQLILRDSFQHAVASSSKEVVHAEVKDMELKGMDELSCVAMEMVRLIETATAPIFAVDI
DGRINGWNAKVSELTGLPVEEAMGKSLVHDLVLKESEEIADKLLLNALRGEEDKNVELRL
RIFGAEHQNEAVFLVVNACSSKDYTNNAVGVCFVGQDITELKVVMDKFIHIQGDYKAIVH
SPNPLIPPIFASDENTCCSEWNTAMEKLTGWNRQDVAGKMLVGEIFGNCCRLKGPDTLTK
FMIVLHNAMGNQDTDKFPFSFFNKNGKYVQTLLTANKRVSIDGQIIGAFCFLQIASPELQ
QALSVQRQQEMKCDSKMRELAYICHEIRNPLSGIRFSNSLLEATNLTEDQKQLLDTSAAC
EKQMLKIMKDVNLENIENGSLELEKAEFVIGSVIDAVVSQVMLFLRERGLQLIRDIPEEV
KTLAVHGDQFRIQQVLADILLNMARYAPSPEGWVEIQLSPSLKWISEGITVAHIEFRIVC
PGEGLPPELVQDMFSSRWVTQEGLGLSICRRILKLMNGEVQYIRESERCYFLIVLDLPMP
KRGLKIVG
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcatcggggagcagatcaacgaatgcaaataatccgcagtattcacaagcacaa
gcacgagcgcaatcttcaggtaggggcagccctcgctgccatgctaaaaatgctcataat
gattctggcaggaataggggaggcgattccatgagtaaggctgtagcgcagtacacggtg
gatgcgagacttcatgctgtttttgagcaatctggtgagtccggaaaatcttttgactat
tcgcagagtgttaaggcttcgactcagtctgttcccgagcagcagatcactgcttatttg
tcgagaatacagcgcggtagccatattcaaccatttggttgtatgataggcgtggatgaa
tttagttttcgagtgatagcgtattcggaaaatgctgtggaaatgatgggcttgatgcct
cagtcggtccctagccttgaaaaaccagaaattcttacatttgggactgatgtcagagct
ctgtttacaccctcgagctctgttttgctggagagggcatttggggcgagagagatcact
ctgttgaatcctatttggattcattctaagaattccgggaaaccgttttatgcaatttta
catagaatagacgttggaatagttattgatttagaacctgcgaggaatgaggatccagcc
ttgtcgattgctggggccgtccagtcacagaagctcgctgtgagggcaatttctcatttg
cagtcgcttccaggtggggatatcaagcttttgtgtgacacggtcgttgagagcgtgagg
gacctcacagggtatgatcgtgtgatggtttataagtttcatgaagatgaacatggcgag
gttgttgcagagagcaaggggccgggtttagagccttatattggtttgcattatccttcc
acggacattccccaggcttcaagatttttgtttaaaaagaatagggttcggatgattgtg
gattgccgtgccacgccagttagagtcgtccaggacgaagcattagttcagtccttgtgt
ttagtaggctcaactctcaggtctcctcatggttgccatgcccaatacatggctaacatg
ggttcgattgcatcattgacattggctgttataattaacggaaacgatgaagatggtgtt
gaaggaagaaactctatgaggctgtggggcttggttgttggccatcatacttctgctcga
tgcattcccttcccacttcgttatgcttgtgaattcctaatgcaggcatttgggcttcag
ctgaatatggaattacagctggcatcacagttctcggagaaacgagttttaaggacccag
actctgttgtgtgatatgttacttcgagattcacccactggaattgtcatgcagagccct
agtatcatggacctggtcaagtgtgacggtgctgcactgtactaccagggtaaatattac
cctctgggtgtcactcctaccgaagcgcagataaaggatattatcgcatggctcttggca
tttcacggggattcgactggtttgagcgctgatagtctagctgatgctggatattctggg
gctgctgctctaggggatgctgtctgtggaatggctgttgcatatattacttcaagggat
tatttgttctggttccgttcccataccgcaaaagagatcaaatggggtggggcaaagcat
catcctcaagacaaagatgatggacagaggatgcatcctcgctcttcgtttaaagcattt
ctagaagttgtcaagagccgaagtctgccatgggagaatgcagaaatggatgcaagtcac
tctttgcagctaattttaagagattcatttcaacatgctgttgcaagcagttctaaggaa
gttgtgcacgctgaggttaaggacatggaattaaaaggcatggatgaactcagttgtgtt
gccatggaaatggttaggttgatagagactgccactgctcctatatttgctgtagatatt
gatggccgcataaacgggtggaatgcaaaagtctcggagttaactggactacctgttgaa
gaagcaatgggaaagtccttggttcatgatcttgtactaaaagagtcagaagaaattgca
gataaacttctccttaatgctctaagaggtgaggaagataagaacgtagaattaaggcta
aggatatttggtgctgaacatcaaaatgaagctgtatttttggtggtcaatgcttgctct
agcaaggactatacaaacaatgcagtgggtgtatgttttgttggtcaggacattactgag
ctgaaagtggtgatggacaaattcatccacattcaaggtgattataaggcaattgtacac
agtcccaaccccctgattccacctatatttgcttcggatgagaacacttgttgctctgag
tggaacactgctatggaaaagctcactgggtggaataggcaggatgttgcagggaagatg
ctagttggggaaatatttggcaattgctgtcggcttaagggtcccgatactttgacgaag
tttatgattgtcttgcacaatgcaatgggcaaccaggatactgacaaattcccattttct
ttttttaacaaaaatgggaaatatgtgcaaactctcttgaccgcaaacaagagggtgagt
attgatggccagataattggagccttttgcttcttgcaaattgcaagtcctgaactgcag
caagctttgagtgtccagagacaacaggaaatgaagtgtgattcaaagatgagagagttg
gcttatatttgccatgaaataagaaatccactgagtggaatacgattcagtaactctctc
ttggaagcaacaaacttgacagaagaccaaaaacagcttcttgatactagtgctgcttgt
gagaagcaaatgctaaagattatgaaggatgtcaatcttgaaaacattgaaaatggttct
ctggagctcgagaaggcagaatttgtaattgggagtgtgatagatgctgtggtcagccaa
gtaatgttatttctgagagagagaggtctgcaattgatccgtgacataccagaggaagtc
aagacactggccgttcatggtgaccaatttagaattcaacaggtcctggctgatatttta
ctgaacatggcacgctatgcaccctctcccgaaggttgggtggagatccaactttctcca
agtctgaaatggatttctgaaggaataaccgttgcgcacattgaattcaggatcgtatgc
ccaggtgaaggacttccacccgaacttgtccaagacatgttcagcagtcgatgggtgacc
caagaaggcctaggactgagcatctgccggagaatattaaagcttatgaatggagaagtt
caatacatcagagaatcagaaagatgttatttccttattgttcttgatctgccaatgcca
aagagaggcttgaagatcgttggctga
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