Primulina eburnea: 140813938
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Entry
140813938 CDS
T11060
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pebu03021
]
140813938
Transcription machinery [BR:
pebu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
140813938
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
HTH_31
Motif
Other DBs
NCBI-GeneID:
140813938
NCBI-ProteinID:
XP_073028862
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Position
15:complement(350964..355371)
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AA seq
522 aa
AA seq
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MGFRLNLKWGGLSVKSPLSSSFPSSYPCNSNLLARLSAASLIYRVTETFADNSLAQACSS
SSQLLENFYSGTRETKILEKEGESAYLTSLQATQTSRFKLMMKNLDMLEDIFVDTDLVRL
EGDILKQLERLGALRYFRACLSRTLQSVPAKLAEEPSLNDPVTGYSSKLNFSTGKKELRK
LRSKRVLEKENGSSMQEFGLETVSNNIKPPKLIRQSRPRNKRQKVTRNEAELSSSVKLVA
ELEKIRLILEEETGEVPTLSSWAEATGIKKKELLHHLHYGWHCMDELVRSTRSLVLFIAR
NYRGLGVSFDDLIQAGNLGVLQGAERFDQSRGFKFSTYVQYWIRKSISTLIARHARGIRI
PCSLSKGINQIQKARKYLSTSIGNHPDDQEIAKFTGLSLAKIKSASECLRVVGSIDQKLG
EGISIKYLEATPDTSIANLEEAVIRKHLVKDLYTLVNGLEPREIQVLMLRFGLKNCQRRS
LEEIGVLFGVSKEWIRKIERGALTKLRNEDCLKILRHYACMQ
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcagactcaacctcaaatggggtggtctctccgttaaatcccctctgtcttca
tcgtttccttcttcatatccatgtaattccaatctattggctaggctgtctgccgcatcc
ctcatatatcgggtaactgagacatttgctgataattccctggcacaagcttgttcttct
tcctcacaacttctggagaacttttactctggaactagagaaacaaagatattggaaaaa
gagggtgaatcagcatatctgacgagccttcaagccacccaaacatcacggttcaagtta
atgatgaaaaatcttgatatgttggaggacatatttgttgacaccgacttggtaaggttg
gaaggagatattctaaagcagttagaaaggctcggtgctctaagatatttccgtgcatgt
ctatccaggaccctccagtctgtacctgccaagcttgctgaagaacctagtttaaatgat
ccggtgactggctattcaagcaaactgaatttttctactggaaaaaaagaactgagaaaa
ttaaggagtaaacgagtattggaaaaggaaaatggcagttccatgcaagaatttggcttg
gaaactgtttcaaataatattaagcctcctaaattaataagacaatcgaggccaagaaat
aaaagacagaaggtcactaggaatgaggcagaattgtctagtagcgttaagttggttgca
gaattggaaaaaatcaggttgatactggaggaagaaaccggcgaagttcctaccttgagt
agctgggctgaagccactggaattaaaaagaaagagttgctgcatcatttgcattacggt
tggcattgcatggacgagcttgtaagaagtacacgttccttggttttgtttattgcaaga
aactatcggggacttggagtgtcctttgatgatctgattcaggcaggaaatttaggtgtc
ttgcaaggtgctgaaaggttcgaccaatcaagagggttcaaattttcaacgtatgtccag
tattggataaggaaatctatctcaacattgatagcaagacatgctagagggatcagaatt
ccttgctcattaagcaaagggataaatcaaatacagaaggcacgaaaataccttagcacc
agcattgggaatcatcctgatgatcaagaaattgccaagttcactggcctatctttagct
aaaattaagtctgctagcgaatgcctcagggttgtgggatctatcgatcagaaactcgga
gagggaatcagtatcaaatatctggaagctacgccggatacatcaatagcaaatctagaa
gaggctgtgataaggaaacatttggtgaaggatttgtatactcttgtgaatggcttggaa
ccgagagagattcaagtgttaatgctgagatttgggctaaaaaattgtcaacgaaggtcg
ctggaggaaatcggggtgctgtttggtgttagcaaagagtggataagaaaaatagagagg
ggagctttgacaaaattaaggaatgaggattgtcttaaaattttgcgtcattatgcatgt
atgcagtaa
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