Primulina eburnea: 140814220
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Entry
140814220 CDS
T11060
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
pebu Primulina eburnea
Pathway
pebu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
140814220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pebu03400
]
140814220
DNA repair and recombination proteins [BR:
pebu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
140814220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c
HATPase_c_3
DNA_mis_repair
TP6A_N
Motif
Other DBs
NCBI-GeneID:
140814220
NCBI-ProteinID:
XP_073029265
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All DBs
Position
1:2908467..2925686
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AA seq
1163 aa
AA seq
DB search
MKHIKGLPEAVHSSMRSGVVICDLTRIVEELVLNSIDAGATEVSVAVRVGNCYIKVVDNG
SGITRDGLVLLGEQYATSKFDPMDSMDAGMESFDFHGETLCSISDISLLEIVTKARGRPN
GYKKIMKNRKCLFLSISDDRLDSGTTVTARDIFYNQPVRRKHMESSPKVLESIRMSVLRI
SLIHVNASFKVMDSESACELLHVGPSHPPLSILFSNSRIGGALHRLNISSGALNVSGHIS
PPLQNFSLKVIQYIYINSRFICKGPIHKLLNQLATKFDVSNSSKPTAGSQNVKRNKGQMG
PTFILNLSCPRSHYDIVASEQSRTSVEFKDWGPVLSCIENGVVNLWTENLSHATFESGRK
RFRGQNIPTSIDLDTTQLKNLSENYDNFHAWEECASSRRETSPKVYKVKKHQSGAGFWPD
ADYLSRSCDQSQSGHRVSKNEDSSCRRNPCCVFSPDCYHFIGYSSDKQEAGVSFPEMGFL
QKTYADTNNMSMSRTSVGCLALGDDIPINRDLRKSLRRCYFQRSFPHDKKSSADDERSEF
ESQDLRIQEKWVDCDKNVENEICPVFYGRDVPCNKEPPFQDSPMIPYDTHEDLEFMIRDS
LDSTEVFSDIITDSCKHFLNCKSSQQSSGSGRCPITAKQIVGTKFPETLVESHSEFDEDS
TQGYFIHREDDDLVGGNSSLKGNWFRQSCSIMNSFLDQKKGIGDYDWDDFENSPSEYPLE
TFCETDWSPLPFFNDNSSKRYSVSSFDHDPLLENDCGRPNDRMQERTSNRKKSSIRSRSA
PPCYKGKKRFFGLSDSSSVSARSSCQMIAKTLLSTGPSSLNPALLHEENVSLRPGLERTP
ETIKIQDGISPKQQLTSMETVGRVDFQEIHDPLDSGQKWRKYCLPAEGGHARCYNKDQDT
ILDISSDSFHLIRDSLVPTTIDKTSLDDAKVLNQVDKKFIAVVARETLIVIDQHAADERI
RLEELRHKVLSGEMKKITYLDAEQEMVFPEIGYQLLHNYEEQIQKWGWICNIHSRGTGSF
TRSIDHLHRQATAVKLLAVPCIVGVNLTDGDLLEFLQQLGDTDGSSTIPPSVHRVLNSKA
CRGAIMFGDTLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLAILHDKITKLGSQKL
WHGLHQHELSIQRSAQRLSSAIG
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacatcaagggtttaccagaggcggttcacagttccatgcgttcaggagttgta
atatgtgatttgacaaggattgttgaagagctcgttctaaatagcattgatgcaggtgct
accgaggtgtctgttgcagtcagggttggtaattgctatattaaagtggtggataatgga
tctggtattacacgagatggattggtgcttctgggagaacaatatgcaacatcaaagttt
gatcccatggattcaatggatgctggtatggaaagctttgactttcatggagaaactctg
tgctcaatttctgatatatctttgctggaaattgtgacaaaagcacgtggaaggccaaat
ggatataaaaagataatgaagaaccgcaagtgtttgtttctttccataagtgatgataga
ctagattcaggcactacagttactgcccgtgatatattttacaatcaaccagttcgcagg
aaacacatggaatccagtcccaaggtcttggaatccatcagaatgagtgtgctaagaatt
tccctcattcatgtgaatgcctcctttaaagtcatggattcagagagtgcatgtgagctg
cttcatgttggaccttcccaccctcctttgtcaatactttttagtaattccaggatcggg
ggagctttgcatagattgaacatatctagtggtgcattgaacgtttctggacatatctct
ccccctttgcaaaatttttctctaaaggtgatacaatatatatacatcaattcaagattt
atttgcaaaggaccaatacataaactattgaatcagttggcaactaaatttgatgtatcg
aattcatcaaagcctactgctggttcccaaaacgtgaaacgaaataagggtcagatgggt
ccaacattcattttgaatctaagctgcccaagatctcactatgatatagttgcttctgag
caatcaaggacctcagttgaatttaaggattggggtcctgtactttcttgcattgagaat
ggcgtcgtcaacctttggactgagaatctgtctcatgccacttttgaaagtggaagaaag
agattcaggggacagaatatcccaacatctatagatcttgataccacacagctgaagaat
ctatctgaaaattatgataattttcatgcttgggaggagtgcgcatcttcacgcagagaa
acttccccaaaagtttataaggttaaaaagcatcaaagtggggctggtttttggcctgat
gctgactacttaagtcgatcgtgcgatcaatctcaatctggtcacagagtatcaaaaaat
gaagatagtagctgccgtcgaaacccttgctgtgttttctctccagattgttaccacttt
attggatattcatctgataaacaagaggctggtgtgtcatttccagaaatgggtttctta
caaaaaacttatgctgacacaaataacatgtcaatgagtaggacatctgttggttgcctt
gcacttggcgatgatatacctattaatcgggatctgagaaaatctctgaggcgctgctac
tttcaaagaagctttccacatgacaaaaaatcatctgcagatgatgaaagatctgaattt
gaaagtcaggacttgagaatacaggaaaagtgggttgattgtgataagaacgttgagaat
gaaatttgtcctgtcttttatggaagagatgtaccgtgcaataaagaaccaccatttcaa
gattctcctatgattccatatgacacacatgaagacttagagttcatgataagagactcc
ttggattcaactgaagtatttagtgacatcataactgactcctgtaaacatttcttgaac
tgcaagtcaagtcagcaatcttctggttctggaaggtgccccattacagcaaagcaaatt
gttgggaccaagtttccggaaactctggttgaaagtcactctgaatttgatgaagattct
acgcagggatatttcattcatagagaagatgatgatctcgtaggtggcaattcaagtttg
aaaggaaattggttccggcaaagttgctcaattatgaactctttccttgatcaaaagaaa
ggaattggggattatgattgggatgactttgagaattctccatctgaataccctttagaa
acattttgcgaaactgattggtctcctttaccttttttcaatgacaatagttccaaaaga
tactcagtgtcatcattcgatcatgatcctttgttggagaatgactgtggaagaccgaat
gataggatgcaagagagaacatctaatagaaagaaaagctcaataaggagccgttcagct
ccaccatgttacaaaggcaagaagagattttttggtttgagtgattcttccagcgtgtcc
gcaagaagcagctgccagatgatcgccaaaacactgttatctacagggccaagcagcttg
aatcctgcactacttcatgaagaaaatgtgagcttaaggccagggttagaaaggacacca
gagaccatcaagattcaggatggcatatcaccaaagcagcaactaaccagcatggagact
gttggaagagtagattttcaagaaatccacgatcctttggattctggacagaaatggaga
aagtattgtttgcccgccgagggtgggcatgcacggtgttataacaaagatcaggatacc
atacttgacatctcctcggactcctttcaccttattcgtgattcattagttcctacaacc
attgataagacctcccttgatgatgccaaagtccttaatcaggtggataagaagttcatt
gcagttgtggctagagaaaccctcattgtgattgatcagcatgctgctgatgagagaata
agactggaagaattgcgccacaaggtgttatctggagaaatgaagaaaatcacctacctg
gatgcagagcaagaaatggtctttccggaaattggatatcagttattgcataattatgag
gaacaaattcagaagtggggttggatatgcaatattcattcccgtggtacaggttccttc
acaagaagtatagatcatctacacagacaggcaactgccgttaaacttctcgcggtacca
tgtattgtgggtgtcaatttaaccgatggtgatctgctagaatttcttcaacagcttggt
gatacggatggatcgtcgaccatacctccatcggttcatcgcgtacttaatagcaaagca
tgtaggggtgcgatcatgtttggagatacattactgccttccgaatgttcccttatcgtt
gaagagctaaaacaaacttcactgtgtttccagtgtgctcatgggagaccaaccactgtt
ccgctagtcaacttagccatcctgcacgataagataactaagcttggttcacagaagttg
tggcatggattacaccaacacgagctcagcatacaacgcagtgcacagcgtctaagctct
gctattggttag
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