Primulina eburnea: 140814548
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Entry
140814548 CDS
T11060
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pebu Primulina eburnea
Pathway
pebu00040
Pentose and glucuronate interconversions
pebu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140814548
Enzymes [BR:
pebu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140814548
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
140814548
NCBI-ProteinID:
XP_073029669
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All DBs
Position
15:complement(32673587..32677949)
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AA seq
453 aa
AA seq
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MAMGASGKWLRPLFSLLLLLVLFVGAMSRVHQNESTLNFRAVDKEQLQSSPNSTMAARSE
GIDEGTALNEHAVDDPEEVAKMVEMAIQNSTERRKLGFFSCGTGNPIDDCWRCDPNWHNN
RKKLADCGIGFGRNAIGGRDGQFYVVTDPGDDDPVNPRPGTLRHAVIQKEPLWIVFKRDM
IITLKQELIMNSFKTIDGRGVNVHIANGGCITVQFITNVIIHGLHIHDCKRTGNAMVRSS
PSHYGWRTMADGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEV
ILLGHSDNYVRDKQMQVTIAYNHFGEGLIQRMPRCRLGYFHVVNNDYTHWEMYAIGGSAN
PTINSQGNRYLAPTNPFAKEVTKRVDTAESQWKGWNWRSAGDLMLNGAYFTPSGAGASAS
YARASSLGAKSSSMVGSITSSAGVLGCRPGCQC
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgggagcttccggaaaatggctgcggcctctgttttctttgctgctgctgctc
gtgcttttcgttggagcaatgtcaagagttcaccaaaacgaatcaaccctaaatttcaga
gctgtggacaaagagcagttgcagagctctccaaactcgacaatggcggcgaggtcggaa
ggaattgatgagggtaccgctttgaatgagcatgcggtggatgacccggaggaggttgca
aaaatggttgaaatggccatccagaacagcacagagaggcgaaaacttggatttttctcc
tgtggaactggtaaccctattgatgactgctggcgttgtgatccgaattggcataacaac
cgaaagaaacttgctgactgtggtattggttttgggcgcaatgccattggtggacgtgat
ggccaattctacgttgtcactgatcctggtgatgatgaccctgtcaaccctaggcccggc
actctacgtcatgctgttatccagaaggagcctctttggattgtgttcaagcgcgacatg
atcataactttgaagcaagagctcataatgaacagctttaagaccatagatggtcgtgga
gtcaatgtgcacattgctaatggagggtgcatcacagtccaattcattaccaatgtgatc
attcacgggctacacattcacgactgtaagcgaacaggaaatgcaatggtgcggagctca
ccatcacattatggttggaggacgatggctgatggtgatgccatttctatctttggctca
agccatatctgggtggatcataactcgctatctaactgtgctgacggccttgtagatgct
gtcatgggctctactgccattaccatttcaaacaattattttacccatcataatgaggtt
atactgttgggtcatagtgataattatgttagagacaagcaaatgcaagtgacaatcgcc
tataatcattttggggaaggcctcattcagagaatgccaaggtgcagacttggatacttc
cacgttgtgaacaatgactacactcattgggagatgtatgccatcggtggaagtgcgaac
cccaccatcaacagccaaggcaacagatatcttgcaccaaccaatccttttgcaaaagag
gtgacaaagagggtagacactgctgagagtcaatggaagggttggaactggagatcagcc
ggtgacctgatgttgaatggagcttattttactccatctggagccggagcttcagccagc
tatgctagagcttcaagcttaggtgccaagtcttcttccatggttggatctatcacttct
agtgctggagttcttggttgccggcccggctgccagtgctaa
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