Primulina eburnea: 140814840
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Entry
140814840 CDS
T11060
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
pebu Primulina eburnea
Pathway
pebu03082
ATP-dependent chromatin remodeling
pebu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140814840
03083 Polycomb repressive complex
140814840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pebu03036
]
140814840
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
140814840
Histone modification proteins
HAT complexes
HATB complex
140814840
HDAC complexes
Sin3A-HDAC complex
140814840
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
140814840
PRC2.2
140814840
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
140814840
Heterochromatin formation proteins
Other heterochromatin formation proteins
140814840
Chromatin remodeling factors
NuRD complex
140814840
NuRF complex
140814840
NuRF complex (fruit fly)
140814840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD_LRWD1
Beta-prop_EML
WD40_RFWD3
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
MIOS_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
DUF6922
Motif
Other DBs
NCBI-GeneID:
140814840
NCBI-ProteinID:
XP_073030033
LinkDB
All DBs
Position
15:3995382..3998468
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AA seq
394 aa
AA seq
DB search
MEEVVEEEFSVWKKNTPLLYDLVICHSLEWPSLTVQWLPSLSQSGGGDLSVHKLILGTHT
SDDVPNFLMVAHAYLPRDPTSAIEVDPDNSVIPKAEIVQKIQVDGEVNRARCMPQNDAIV
ASKTNGTEVYVFDCTKQLLNTRHGCSDPDLRLKGHEKEGYGLSFSPSKEGYLLSGSNDCK
ICLWDISAMPQDKVLEAKYIYEGHDNVVEDVSWHSKNENLFGSVGDDCKLMIWDLRSNKF
QHSVIVHEKEVNYLSFNPFNEWVLATASSDTTVGLFDIRNLSSPLHALSSHMEEVFQVEW
DPNHETVLASSADDRRLMVWDINRVGDEQLEGEAEDGPPELLFSHGGHKAKISDFSWNKN
QAWVISSVAEDNTAQVWQMAESIYRDEDDIQTTD
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtggtggaggaggagttctcggtgtggaagaagaacacgccgttgttgtac
gacctcgttatctgccactccctcgagtggccgtctctcacggttcagtggttgccgtcg
ctgtcgcagtccggaggcggtgatctgtccgttcataagttgattctggggacgcacact
tctgatgacgtacccaacttcctcatggtcgcgcatgcttaccttccccgagaccccacc
tctgcgatcgaagtcgaccccgataattcagttattcccaaggccgagatagttcaaaag
atacaagttgatggagaagtgaacagggcccgctgcatgccacaaaatgacgcaatagtt
gcttcaaagacaaatggtactgaagtatatgtgttcgactgtactaagcaattgttgaat
accagacatggttgtagtgatcctgacttgagattgaagggacatgaaaaagaaggatat
ggtttatcatttagcccttctaaagaaggatatcttctgagtggttcaaatgattgcaaa
atttgcttgtgggatatttctgcaatgcctcaagataaagtacttgaagctaaatatatt
tacgagggccacgataatgtggttgaggatgtgtcatggcattccaagaatgaaaattta
tttgggtctgtgggagatgattgcaagctaatgatatgggacttacgctcaaacaagttc
caacactctgttattgtacacgagaaagaggtcaactatttatctttcaatccatttaac
gagtgggttttggccactgcttcctctgacactacagttgggctgttcgacattcggaac
ttgagttctccactgcatgctctcagcagtcatatggaggaggtatttcaggtagaatgg
gatcctaaccatgaaactgttcttgcatcttctgccgatgacaggagattgatggtttgg
gacattaacagagtgggagatgagcaattggaaggtgaagcagaagatggtcctcctgag
ctcctcttttctcatggtggtcacaaagcgaagatttccgacttttcatggaacaagaac
caggcatgggtaatttcgagtgtagcagaggacaatactgctcaggtgtggcagatggcg
gaaagcatctaccgagatgaggatgacatccaaaccacagattga
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