Primulina eburnea: 140814958
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Entry
140814958 CDS
T11060
Name
(RefSeq) transportin-1-like
KO
K18752
transportin-1
Organism
pebu Primulina eburnea
Pathway
pebu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140814958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140814958
03009 Ribosome biogenesis [BR:
pebu03009
]
140814958
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
140814958
Ribosome biogenesis [BR:
pebu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
140814958
Pre-60S particles
140814958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IPO5
TPR_DNAAF5
IBN_N
HEAT_MROH2B_C
TPR_IMB1
TOR1L1_N
HEAT_2
HEAT_Maestro
TIP120
Proteasom_PSMB
Ltn1_1st
Motif
Other DBs
NCBI-GeneID:
140814958
NCBI-ProteinID:
XP_073030155
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All DBs
Position
15:26280094..26326241
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AA seq
895 aa
AA seq
DB search
MASSGGGEASTWRPQEEGLREICVLLEKQMAPSSDDKSQIYQKLQQYSQFPDFNNYLAFI
FARVEAKSIEIRQAAGLLLKNNLRSALKTMLPTNQQYLKSELLPCIGAADRQIRSTAGTI
ISTFVQIGGVAAWPELLHALMKCLDGKDVNHIEGAMDALSKICEDAPQVLDSDIPGLSER
PIDVFLPRFLQLFQSPNVTLRKLSLGSVNQYILLMPTVLYSSMDKYLQGLFVLSNDPAPE
VRKLVCSAFVQLVEVRSAVLEPHLRNVIEYILIVNKDPDDEVALEACEFWSTYCEAELPP
ENLREFLPRLIPVLLSNMAYADDDESVLEAEEDGSLPDRDQDLKPRFHSSRFHGSEDAEE
EDDDIVNVWNLRKCSAAALDFLSNVFGDDILPTLMPVIQAKLSTGGDEAWKDREAAVLAL
GAIGEGCINGLYPHLSEIISFLIPLLDDKFPLIRSISCWTISRFSKYIVQGTAHQEGHDQ
FDKILIGLLRRLLDDNKRVQEAACSAFATLEEEAAGGLVSRLDVILRHLICAFGKYQRRN
LRIVYDAIGTLADAVGGELNQPQYLEILMPPLIAKWQQLSNSDKDLFPLLECFTSIAQAL
GTGFSHFALPVFQRCVDIIQTQQLAKVDPVSAGAQYDKEFIVCSLDLLSGLAEGLGAGIE
SLISQSNLRDILLQCCMDDAYDIRQSSFALLGDLARVCPVHLHSRLSEFLDVAAKQLNTP
NLKETLSVANNACWAIGELAIKFHKEVSPVVLTVISCLVPILQHPEDLNKSLIENSAITL
GRLAWVCPELVSPHVEHFMQSWCMALSMIRDDIEKEDAFRGLCAMVSANPSGALHSLVYM
CKAIASWHEIRSQDLHNQVSQVLHGYKQMLKNGAWEQCMSALEPPLKERLSMYQV
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaagcggcggcggcgaagcatcgacgtggcggccgcaggaagagggactgcgg
gagatctgtgtacttctggagaaacagatggctccgtcctccgatgacaagtcgcagatt
tatcagaagctccagcagtactctcagtttcctgatttcaataattacctggcattcatt
tttgcgcgcgtggaggcgaaatcaattgaaattaggcaagcagcagggttacttctaaaa
aataaccttagaagtgcattaaagactatgctgcctacaaaccagcaatacctgaagtca
gagttgttaccttgtatcggagcagctgataggcaaatcaggtcgacagctgggactatc
attagtacttttgttcagattgggggagtagcagcatggcctgaactgctgcatgcactt
atgaagtgcttagatggtaaggatgtcaatcacatagaaggtgctatggatgctttgtct
aagatatgtgaggatgctccccaagtgcttgattctgatattcctggattatctgaacga
cccattgatgtttttcttccaagattcctccagcttttccaatcgccaaacgttacattg
aggaagctttccttgggttctgtaaatcagtacatcttgctaatgcctacagtcttatat
tcgtctatggacaaatatttgcaaggtttatttgttctctctaatgaccctgctccagaa
gttaggaagttggtgtgttctgcatttgttcagctagttgaagttcgttcagctgtcctg
gagcctcacttaaggaatgtaatcgagtatatattgatagtcaacaaggaccccgatgat
gaagtggctctagaagcttgtgaattttggtcaacttactgcgaagctgaattgccccct
gaaaacttgagagaatttttaccacgccttattccagttttgctttcaaacatggcttac
gctgatgatgacgaatcagttttggaagctgaggaggatggatctcttccggatcgagat
caggatctgaaacctcgtttccattcgtcacgttttcatggatcagaggatgcagaagag
gaggatgatgacattgtgaatgtttggaatttgagaaagtgcagtgcagctgctctggat
tttctctccaatgtttttggggatgatattttacccacattgatgcccgttatacaggca
aagttgtccactggcggtgatgaagcttggaaagaccgggaagctgcagttttagctctt
ggtgctataggtgagggttgcattaatggactgtatccccatttgtcagagattatttca
tttctgattccactgctagatgacaagtttccccttatacggagtatctcttgttggaca
atttcccgtttcagcaaatatattgtacagggtactgcccatcaagaaggtcatgaccag
ttcgacaaaattcttattgggctgttacggagattattggatgataacaagcgtgtgcaa
gaggctgcgtgttctgcttttgcgacacttgaagaggaggctgcaggaggattagtatca
cgattagacgtcattcttaggcacttaatatgtgcctttgggaaatatcagagacgaaac
cttagaattgtatacgatgctattggaactttagcagatgctgtcggaggggaactaaat
cagccccaatatctcgaaatcttgatgcccccattaattgcaaagtggcagcagctatcg
aattctgacaaagatctttttccactgttggaatgttttacatcaatagcccaggcacta
ggaactggtttttcacattttgcgctgccggtgtttcagagatgcgttgacattatccaa
actcaacaattggctaaggttgatcctgtttcagctggtgcacagtatgataaagagttt
attgtttgctctttggatcttctctctggactggctgagggccttggggcagggatagag
agtttgatttcacagagcaatttaagagacattctactgcaatgttgtatggatgatgca
tatgatatccgccaaagttcttttgcattgcttggggatcttgctagagtttgcccagtt
catttacattctcgtttatctgaatttcttgatgttgctgccaagcaattgaacactcca
aacctaaaggaaaccttgtcagtcgccaataatgcatgttgggctatcggagaactagcg
ataaagttccacaaggaggtatctcctgttgttctaactgtaatctcatgcttggttcca
atacttcaacatcctgaggacctgaacaaatcgctcatagaaaatagtgccattacactt
ggaagactcgcatgggtttgtccggagcttgtttcaccacacgtggagcatttcatgcag
tcatggtgtatggctttgtccatgattcgcgatgatattgaaaaggaagatgcttttaga
ggtctatgtgcaatggttagtgcgaatccatctggggctttacattcgcttgtttacatg
tgcaaggccattgcaagttggcatgaaataaggagccaggacctgcataatcaagtctcc
caggttttgcatggctataaacaaatgctgaaaaacggagcatgggaacaatgcatgtct
gccttggagccacctttgaaagaacggttatcaatgtatcaagtatag
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