KEGG   Primulina eburnea: 140815013
Entry
140815013         CDS       T11060                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
pebu  Primulina eburnea
Pathway
pebu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pebu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    140815013
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pebu03021]
    140815013
Enzymes [BR:pebu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     140815013
Transcription machinery [BR:pebu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     140815013
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 140815013
NCBI-ProteinID: XP_073030209
LinkDB
Position
15:complement(654911..663051)
AA seq 1207 aa
MGGSDFPKAGPSGVNEKFSNGTTRMDIFDDMDFVCSDSEDDDVGSSFQELDEGSLKTFCK
KASTAFFDQYGLISHQINSYNDFVKYGMQQLFDSIGEIVISPGYDPSKRRDDGWRQASLK
FGKVTLEKPVFWTGDKFSADGGKDYLNLLPRHARLQNMTYSSKIRVDARLEVFTENLASS
DKFKTGVQQQVEKTVLSVHQSDILFGSLPVMVKSDLCNEKGTEKMDCEFDHGGYFIIKGA
EKTFIAQEQMCLKRLWIAKDPNWSIAYRSVAKRKKVHVKLVPKVEHISGGEKILSVYFMA
TEIPIWILFFALGVSNDLEVVRLIDLDIEDCRVANVLVASIHVADKNYEGFRKADNAVNH
IKKLMQGCKFPPTESVEECFKNYFFPNLKSLGQKARFLAYMVKCLLEAYMGLHKVDSRDD
FRNKRLELASELLERELRVHIKHAERRMVKAMQRDLYGDREIQSIEHYLDTSIITNGLSR
AFSTGAWSHPYKKMERISGVVATLRRTNPLQATCDMRKTRQQVSYTGRAGDARYPHPSHW
GKICFLSTPDGENCGLVKNLASLGLVSTNILEKDGLLRKLRQCGMENLVDDTSTSLKGKQ
KVLLDGDWVGVVENSASFVVKLRRKRRRMEVPHQVEIKRDEHHCEVRIFADSGRILRPLL
VVRNLKKIKEVKGDYTFQTLLDNGIIELIGPEEEEDCQTAWGIRYLFTTEKSRLPVKYTH
CELDCSFLLGLSCGIIPFTNHDHAKRVLYQSEKHSQQAIGFSTTNPNARVDTNSHQLYYP
QRPLFRTMLSDCLGKSSYSHQQRGMIPHPEFSNGQCAIVSVNVHLGYNQEDSIVMNRSSL
ERGMFRSEHIRSYKTEVESSEGLGKKLKPEDCISFGKTQSKIGRVDSLDDDGLPFIGANL
QTGDIVIGKHSESGIDHSIKLRHTERGMVHKVVLSANDDGKNFAVVSLGQVRSPCLGDKF
SSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLESALGKGIALGGA
LKHATPFSTPSVEDITAQLHRLGFSRWGHERVYDGRTGEAVRSLIFMGPTFYQRLTHMAE
DKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGAAANLHERLFTLSDSSQI
HICRSCKNVANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSMGISL
KFDTELC
NT seq 3624 nt   +upstreamnt  +downstreamnt
atgggtggatcggattttccgaaagctggacctagtggcgtcaatgagaagttttccaat
ggcaccaccagaatggatattttcgatgatatggactttgtatgttctgattctgaagat
gatgatgttggcagttcttttcaagaattagatgaagggtcgttgaaaactttctgtaag
aaggcttcgaccgccttttttgatcagtatgggctaattagtcaccaaattaattcatat
aacgactttgttaagtatgggatgcaacaattgtttgactctattggtgagattgttatc
tcgcctgggtatgatccatcgaaaaggagagatgatggttggaggcaggcgtctctcaaa
tttggaaaggtcacccttgagaagcctgtgttttggactggcgataagttttcagctgat
ggtgggaaggattatttgaatttgttgccccggcatgcacgtcttcagaatatgacgtac
tcatccaagatcagagttgatgctcgtcttgaggtttttacagaaaatcttgctagcagt
gacaagttcaagactggtgtacaacaacaagttgaaaaaacggtgctaagtgtgcatcag
agtgacattctatttggcagcctcccggtaatggtgaaatcagatttgtgcaatgagaaa
ggaactgagaaaatggattgtgaatttgaccatggaggatattttattatcaagggtgct
gagaagacgttcattgcacaggagcaaatgtgtctaaaaaggctgtggatagcaaaagat
ccaaattggtcaattgcatatcgctcagttgccaaacgaaaaaaagttcacgtaaagtta
gttccaaaagtggagcacatcagtggaggagagaagatcctttcagtttactttatggca
actgaaattccaatctggattctgttctttgccttgggtgtttcaaatgacctagaggtt
gtaaggttgatagatctggacatcgaagactgcagggttgcaaatgtacttgttgcatca
attcatgttgctgataaaaattatgagggtttccgtaaggcagacaatgcagtaaatcac
atcaagaaactcatgcagggttgcaaattcccacctacagagtccgtggaagaatgcttt
aaaaattatttcttccctaacctcaaaagcttggggcagaaggctcggtttctggcatac
atggtaaagtgtctgttagaagcttacatgggacttcacaaagttgacagcagggatgat
ttcaggaacaagaggttggagttggctagcgagctacttgagagagaattgagagttcac
ataaaacatgctgagaggcgcatggtgaaagccatgcaaagggatctttatggagatcgg
gagatacagtcaattgaacactacttggatacttcaataatcacgaatggtctttccaga
gctttttctactggagcttggtcacatccttacaagaagatggagagaatttctggtgtt
gtggctactctaagacgaacaaatcctttgcaagcaacttgtgatatgaggaaaacacgc
cagcaggtttcatacacagggagggctggtgatgctagatacccccacccatctcactgg
ggtaagatttgcttcctttctacacctgatggagaaaattgtggattagttaagaatcta
gcaagcttggggcttgttagtactaatatattggaaaaagatggtctacttcgaaaatta
cgccagtgtggaatggaaaatttggttgatgatacttcaacttcgctcaaagggaagcaa
aaggttttattagatggagattgggttggagtggttgaaaattctgcgtcatttgttgtt
aagctaaggcgtaaacgtcgcaggatggaagtgcctcatcaggttgaaattaagagagat
gagcatcattgtgaagtgcgcatatttgctgattctggaaggatactccggcctctttta
gttgttcgaaatctaaagaagattaaagaagtaaaaggagattatacatttcaaactcta
ttagataatggaatcatagaactaataggaccagaagaagaggaagattgccagactgca
tggggaattagataccttttcaccactgaaaaatctaggctacctgtgaaatacacacac
tgtgagttagattgttcttttttgttaggactgagttgcgggataatccccttcacgaac
catgaccacgcgaaaagagttctctaccagtctgagaagcactctcagcaagcaattgga
ttttctacgacaaatccgaatgccagagttgatactaattctcatcagctgtattacccc
cagaggccacttttccggacgatgctttctgattgtctcggaaaatcatcatattctcat
cagcaaagggggatgatcccacaccccgagttctctaatggccagtgcgcgatcgtgtct
gttaatgtccatctgggatacaaccaggaggactcgattgtgatgaatcggtcatccctg
gagcgtggaatgtttcgatctgaacatattagaagctacaagacagaggttgagagttcc
gaaggattagggaaaaagcttaagcctgaggattgtataagctttgggaaaacacagagc
aaaattggacgggtagacagccttgacgatgatggccttcccttcattggtgccaacctc
caaacaggcgacatagtcataggaaagcattctgaatcggggattgatcacagtattaag
ctgcgacacactgagagagggatggttcacaaagtcgtgctttctgctaatgatgatgga
aagaactttgccgttgtatctctaggacaggttcgttctccatgtcttggtgacaagttc
tcgagtatgcatggacagaagggtgttcttgggtttctggagtcgcaagaaaacttccct
tttacgaaacaaggaatagtcccagacattgtgataaatcctcacgcatttccctcccga
caaactcctggtcaacttttagagtccgccttgggcaaggggattgccctggggggtgca
ctaaaacacgccaccccattttcaacaccatcagttgaagatattacagctcaacttcat
aggcttggattttcaagatggggacatgaaagagtttatgatggtcggactggagaagca
gttcgttccctgatttttatgggcccaactttctaccagcgcctcactcacatggctgaa
gataaagtgaaatttaggaatacagggccagtccatccacttacccgccagcctgttgcg
gataggaagcgatttggtgggatcaaattcggtgagatggaacgcgactgtctattagct
catggtgcagctgcaaatttacacgagcgcctcttcaccctgagtgattcctctcagatc
cacatctgccgcagctgtaagaacgtggccaacgtaattcagcgcccagtttttggtggc
cggaagattcgtggtccctattgtcggttctgtgagtcggtggaagatgtagtgagggtc
aacgtcccatatggagcgaagcttctctgtcaggagctgttcagtatgggaatctctctc
aagtttgataccgagttgtgctga

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