Primulina eburnea: 140816316
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Entry
140816316 CDS
T11060
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pebu03021
]
140816316
Transcription machinery [BR:
pebu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
140816316
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
140816316
NCBI-ProteinID:
XP_073031607
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Position
16:3337320..3340246
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AA seq
518 aa
AA seq
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MGVVTVSSSAATSPLRLSSRFSAHIALSKTPVILAFKTDRSKNIALVAPLESVSLPVGTK
KADEKRCITVKKGSGYVPDVAIDRASSSATELDYNEAAAKLEQIYKHSPATDISDKEVRD
QITKTRRSRGKRTEDAAEVLENKTADTVIRSKTVRTKRLSLENRIALRTKREHEHIVSYQ
KRKQRKNDEREKIDRLVRDYSSSTDLVSLNWKKMKIPPVLPPNEHTWLFKLMEPMKAIIQ
VKEDLENDLGRELNDNELAETRNITNAQLKKEMEVGRAARSKLIKHNLRLVLFVMNKYFR
DFVNGPRFQDLCQAGVKGLMIAIDRFEPNRKFQLSTYGLFWIRHAIIRSMTLSSFTKVSF
GLQSVRVEIQRTKLELSFELQRLPTEKEILDRVGISPERYQEVMRASKPIYSLHARNSVT
QEEFINGITDVDGVEGDKRRQPELLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE
IAGNFNISREMVRKHEVKALMKLKHPARVDYLRHYIFK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcgtgactgtttctagctctgccgcaacgagtccattgagattgagctcaaga
ttttctgctcatatagctttatcgaaaacacctgttatattagcattcaaaactgatagg
agtaaaaatattgctctagttgcaccactggaatctgtatctttacctgtggggacaaag
aaagcagatgaaaagaggtgtattactgtgaaaaaggggtcaggatatgttccggatgtt
gcaatagatcgagcctcttcaagtgcaacagagttagattataatgaagctgctgccaaa
ttagagcaaatatacaagcatagtcctgcaacagatatttctgacaaggaagtcagagat
caaataacaaagacaaggcgatcacgaggaaagaggactgaagatgctgcagaagtgtta
gagaataaaaccgctgacactgtcatcaggagtaaaacggtaaggacaaaaagattgagc
cttgaaaacaggattgctcttagaacgaaaagggaacatgaacatattgtgtcgtaccag
aaaaggaaacaacggaagaatgatgaaagggaaaagattgataggcttgtaagggattat
tcctcttccaccgatttggttagcttaaactggaagaaaatgaagatcccaccggttctt
cctcctaatgagcatacctggttatttaagctaatggaaccaatgaaggcaattatccaa
gtcaaggaggatttagaaaatgatctaggaagagagcttaatgacaatgaattagcagag
acaaggaatatcactaatgcccagctgaagaaagaaatggaagttggtcgagctgccaga
agtaaattgatcaagcacaacctccgacttgttttatttgtgatgaacaagtattttcga
gattttgtgaatggcccaagattccaagacctttgtcaagctggtgtaaagggacttatg
atagctattgatcgttttgagccaaataggaagttccagctctcaacatatggcctcttt
tggatcaggcatgcaattattcggtctatgacgctttcaagtttcactaaggtctccttt
ggccttcagtcggtcagagtagaaatccagaggacaaagctggagttgtcatttgagctt
caaagactgccaaccgagaaagaaattctagacagagttggaatttccccagaacgatac
caagaagtgatgagggcttcaaaacctatctattctctccacgctcgaaattcagttacc
caagaagaattcattaatgggataactgatgttgatggtgttgaaggagataagagaagg
caaccagaacttctcaggcttgctctagatgatgtgctcgattctttgaagcccaaagag
agtttggttatcagacaaagatatggacttgatggaaaaggagacagaacacttggagaa
attgcaggaaatttcaacatttcaagagaaatggtaaggaaacatgaggtgaaggcactc
atgaagcttaagcatccagctcgggttgactatcttcgacactacatttttaaatga
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