Primulina eburnea: 140816377
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Entry
140816377 CDS
T11060
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
pebu Primulina eburnea
Pathway
pebu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140816377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pebu04121
]
140816377
Ubiquitin system [BR:
pebu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140816377
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Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
140816377
NCBI-ProteinID:
XP_073031702
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Position
16:1401085..1404459
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AA seq
363 aa
AA seq
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MVFRDFGCVSAKDDIDGGMGGPCEGLKMSEWKDIPAELLLRILSMVDDQTVVVASGVCHG
WRDAISWGHTHLSLSWCKKGMNDLVLSLVPKFSTLQVLILRQDSPQLLDDAVETIARYCS
DLQELDLSKSFRLTDRSLYALAHGCPNLLKLNISGCSAFSDSAVGYLSGFCRKLKSLNLC
GCVKAASDRALKAIGSNCNNLQSLTLGWCDRVGDEGVKSLAYGCPGLRALDLCGCVLITD
ESVIALANNCLHLRSLGLYYCQYITDKAMYSLAQRRVKNKHEMWTSARKNRQEEEGLTNL
NISQCTALTPPAVQALCDSFPALHTCPGRHSLIISGCLNLTSVHCACGVQTHRPAQAVPH
LAH
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggtttttcgtgattttggctgtgtgagtgctaaggatgacattgatgggggaatgggc
ggtccatgtgaaggattaaagatgagtgagtggaaagatattccagcggagctgttgctg
aggattctttctatggtggatgatcagacggtcgttgtggcatctggggtttgtcatggc
tggagagatgccatttcatggggccatactcatctctccttgtcctggtgcaagaaaggc
atgaatgatcttgtgctatcactagttcccaaattcagcacactccaggttctaatcctt
cggcaagattcacctcagctcctagatgatgctgttgaaacaatcgcacgatattgtagt
gacctgcaagagttggatctcagtaaaagctttagactaacagatagatcgttgtatgcc
ttggctcatggttgcccaaatcttttaaagctgaacataagtggttgttcggccttcagt
gattccgctgtgggatatttatccgggttttgtcggaagttgaaatccttgaatctttgt
ggatgtgtgaaggcagcatctgatagggctttgaaggcgattggatccaactgtaataat
ttgcaatcattgactctgggatggtgtgatcgtgttggtgacgaaggggtaaagagttta
gcatatggttgccctggcctcagagctcttgacttgtgtggatgtgttctaataacagac
gagagcgtgatagcactggcaaacaactgccttcacctaagatccctgggcttgtattat
tgccagtacatcaccgataaagcgatgtattctctagcacagaggcgagtgaaaaacaag
cacgagatgtggacatccgctagaaaaaacaggcaggaggaagaaggcctcacaaacctg
aacatcagccagtgcaccgcccttacgcctccagctgtacaggccttatgcgactcattt
ccggctcttcatacatgccctggtcgccattccctgattataagcggctgtctgaactta
acatcagtgcattgcgcgtgtggtgttcagacacaccgtcccgcacaggccgtgccgcac
ctagctcattaa
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